Detailed information NTG0533232

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: JQR77_RS08765
• Genome accession: NZ_CP069275
• Coordinates: 1706430..1706756 (-)
• Length: 108 a.a.
• NCBI ID: WP_023909980.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain EG007
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1701430..1711756

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JQR77_RS08720	-	1701696..1702121 (-)	426	WP_014608739.1	CPBP family intramembrane glutamic endopeptidase	-
JQR77_RS08725	-	1702078..1702353 (-)	276	WP_011681681.1	hypothetical protein	-
JQR77_RS08730 (JQR77_08735)	-	1702365..1702562 (-)	198	WP_011681682.1	helix-turn-helix transcriptional regulator	-
JQR77_RS08735 (JQR77_08740)	-	1702811..1704004 (-)	1194	WP_084825660.1	acetate kinase	-
JQR77_RS08740 (JQR77_08745)	comYH	1704060..1705016 (-)	957	WP_023909974.1	class I SAM-dependent methyltransferase	Machinery gene
JQR77_RS08745 (JQR77_08750)	comGG	1705061..1705378 (-)	318	WP_023909975.1	competence type IV pilus minor pilin ComGG	-
JQR77_RS08750 (JQR77_08755)	comYF	1705356..1705793 (-)	438	WP_084825661.1	competence type IV pilus minor pilin ComGF	Machinery gene
JQR77_RS08755 (JQR77_08760)	comGE	1705777..1706070 (-)	294	WP_023909978.1	competence type IV pilus minor pilin ComGE	-
JQR77_RS08760 (JQR77_08765)	comYD	1706042..1706470 (-)	429	WP_171815055.1	competence type IV pilus minor pilin ComGD	Machinery gene
JQR77_RS08765 (JQR77_08770)	comYC	1706430..1706756 (-)	327	WP_023909980.1	competence type IV pilus major pilin ComGC	Machinery gene
JQR77_RS08770 (JQR77_08775)	comYB	1706753..1707853 (-)	1101	WP_120764773.1	competence type IV pilus assembly protein ComGB	Machinery gene
JQR77_RS08775 (JQR77_08780)	comYA	1707735..1708676 (-)	942	WP_014622005.1	competence type IV pilus ATPase ComGA	Machinery gene
JQR77_RS08780 (JQR77_08785)	-	1708757..1709119 (-)	363	WP_023909982.1	DUF1033 family protein	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 11928.02 Da
• Isoelectric Point: 9.9219

>NTDB_id=533232 JQR77_RS08765 WP_023909980.1 1706430..1706756(-) (comYC) [Streptococcus thermophilus strain EG007]
MKLMLKKLNAVKLRAFTLIEMLVVLLIISILLLLFIPNLSKQKDSVKETGNAAVVKVVDSQAELYEMKNNKTASLAALVS
EGQITQKQADSYNDYYAKHGGESRSVAN

Nucleotide

• Length: 327 bp

>NTDB_id=533232 JQR77_RS08765 WP_023909980.1 1706430..1706756(-) (comYC) [Streptococcus thermophilus strain EG007]
ATGAAATTGATGTTAAAAAAATTGAATGCCGTTAAATTACGAGCCTTTACTCTGATTGAAATGCTAGTCGTACTTCTCAT
TATCAGTATTCTCCTTTTGCTCTTTATTCCTAACTTAAGCAAGCAGAAGGATTCCGTTAAGGAAACTGGAAATGCGGCTG
TAGTCAAGGTCGTGGATTCTCAGGCAGAACTTTATGAAATGAAGAATAACAAGACAGCTAGCTTGGCAGCTCTTGTTTCA
GAAGGTCAAATTACGCAAAAACAGGCAGATTCATACAATGATTACTATGCGAAACATGGTGGTGAAAGCCGCTCAGTGGC
CAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (14-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus mutans UA140	68.269	96.296	0.657
comYC	Streptococcus mutans UA159	68.269	96.296	0.657
comYC	Streptococcus gordonii str. Challis substr. CH1	62.857	97.222	0.611
comGC/cglC	Streptococcus mitis SK321	61.321	98.148	0.602
comGC/cglC	Streptococcus mitis NCTC 12261	57.407	100	0.574
comGC/cglC	Streptococcus pneumoniae D39	57.547	98.148	0.565
comGC/cglC	Streptococcus pneumoniae R6	57.547	98.148	0.565
comGC/cglC	Streptococcus pneumoniae Rx1	57.547	98.148	0.565
comGC/cglC	Streptococcus pneumoniae TIGR4	57.547	98.148	0.565
comGC	Lactococcus lactis subsp. cremoris KW2	55.66	98.148	0.546
comYC	Streptococcus suis isolate S10	59.091	81.481	0.481
comGC	Staphylococcus aureus MW2	51.282	72.222	0.37
comGC	Staphylococcus aureus N315	51.282	72.222	0.37