Detailed information NTG0533230

Bioinformatically predicted

Overview

• Name: comYF
• Type: Machinery gene
• Locus tag: JQR77_RS08750
• Genome accession: NZ_CP069275
• Coordinates: 1705356..1705793 (-)
• Length: 145 a.a.
• NCBI ID: WP_084825661.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain EG007
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1700356..1710793

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JQR77_RS08710 (JQR77_08720)	-	1700420..1701082 (-)	663	WP_023909970.1	CPBP family intramembrane glutamic endopeptidase	-
JQR77_RS08715 (JQR77_08725)	-	1701179..1701622 (-)	444	WP_011681680.1	hypothetical protein	-
JQR77_RS08720	-	1701696..1702121 (-)	426	WP_014608739.1	CPBP family intramembrane glutamic endopeptidase	-
JQR77_RS08725	-	1702078..1702353 (-)	276	WP_011681681.1	hypothetical protein	-
JQR77_RS08730 (JQR77_08735)	-	1702365..1702562 (-)	198	WP_011681682.1	helix-turn-helix transcriptional regulator	-
JQR77_RS08735 (JQR77_08740)	-	1702811..1704004 (-)	1194	WP_084825660.1	acetate kinase	-
JQR77_RS08740 (JQR77_08745)	comYH	1704060..1705016 (-)	957	WP_023909974.1	class I SAM-dependent methyltransferase	Machinery gene
JQR77_RS08745 (JQR77_08750)	comGG	1705061..1705378 (-)	318	WP_023909975.1	competence type IV pilus minor pilin ComGG	-
JQR77_RS08750 (JQR77_08755)	comYF	1705356..1705793 (-)	438	WP_084825661.1	competence type IV pilus minor pilin ComGF	Machinery gene
JQR77_RS08755 (JQR77_08760)	comGE	1705777..1706070 (-)	294	WP_023909978.1	competence type IV pilus minor pilin ComGE	-
JQR77_RS08760 (JQR77_08765)	comYD	1706042..1706470 (-)	429	WP_171815055.1	competence type IV pilus minor pilin ComGD	Machinery gene
JQR77_RS08765 (JQR77_08770)	comYC	1706430..1706756 (-)	327	WP_023909980.1	competence type IV pilus major pilin ComGC	Machinery gene
JQR77_RS08770 (JQR77_08775)	comYB	1706753..1707853 (-)	1101	WP_120764773.1	competence type IV pilus assembly protein ComGB	Machinery gene
JQR77_RS08775 (JQR77_08780)	comYA	1707735..1708676 (-)	942	WP_014622005.1	competence type IV pilus ATPase ComGA	Machinery gene
JQR77_RS08780 (JQR77_08785)	-	1708757..1709119 (-)	363	WP_023909982.1	DUF1033 family protein	-

Sequence

Protein

• Length: 145 a.a.
• Molecular weight: 16345.87 Da
• Isoelectric Point: 9.3928

>NTDB_id=533230 JQR77_RS08750 WP_084825661.1 1705356..1705793(-) (comYF) [Streptococcus thermophilus strain EG007]
MYLSSKLRAFTLLECLVALLVIAGSVQVYQGLTTVLVSNVKRVRQQENQDWLLFVQQMEAELEGCQLVKVEGNKLYVKQD
NQDLAFGLSSASDFRKTNADGRGYQPMLFDVKSSKVSQKNQIVTIQVTLKNGLQRSFIYAFEKTG

Nucleotide

• Length: 438 bp

>NTDB_id=533230 JQR77_RS08750 WP_084825661.1 1705356..1705793(-) (comYF) [Streptococcus thermophilus strain EG007]
ATGTATCTAAGCAGTAAGCTGCGTGCCTTTACCCTCTTGGAATGTCTAGTGGCCTTGTTAGTCATTGCTGGCTCAGTTCA
AGTTTATCAAGGGTTAACCACTGTACTTGTGAGTAATGTTAAGCGGGTAAGACAACAAGAAAACCAAGACTGGCTTCTAT
TTGTTCAACAAATGGAGGCAGAATTAGAAGGATGTCAGTTGGTCAAGGTAGAGGGGAACAAACTCTATGTCAAGCAGGAT
AATCAAGACTTGGCTTTTGGTCTTTCAAGTGCCTCTGATTTTCGAAAAACAAATGCTGATGGTCGAGGCTATCAACCAAT
GCTTTTCGATGTCAAATCTAGTAAGGTAAGTCAAAAGAACCAGATAGTTACCATCCAAGTGACTCTTAAAAATGGACTAC
AAAGGAGTTTTATTTATGCTTTTGAAAAAACAGGTTAG

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (40-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYF	Streptococcus mutans UA140	58.156	97.241	0.566
comYF	Streptococcus mutans UA159	57.447	97.241	0.559
comGF/cglF	Streptococcus pneumoniae D39	50.714	96.552	0.49
comGF/cglF	Streptococcus pneumoniae Rx1	50.714	96.552	0.49
comGF/cglF	Streptococcus pneumoniae R6	50.714	96.552	0.49
comGF/cglF	Streptococcus pneumoniae TIGR4	50.714	96.552	0.49
comGF/cglF	Streptococcus mitis NCTC 12261	48.936	97.241	0.476
comGF/cglF	Streptococcus mitis SK321	48.227	97.241	0.469
comGF	Lactococcus lactis subsp. cremoris KW2	46.763	95.862	0.448