Detailed information NTG0526667

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: I6J15_RS02460
• Genome accession: NZ_CP068056
• Coordinates: 491605..491898 (-)
• Length: 97 a.a.
• NCBI ID: WP_020915989.1
• Uniprot ID: -
• Organism: Streptococcus lutetiensis strain FDAARGOS_1158
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 486605..496898

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J15_RS02415 (I6J15_02415)	-	486907..487362 (-)	456	WP_231853254.1	ABC transporter permease	-
I6J15_RS02420 (I6J15_02420)	-	487363..487563 (-)	201	WP_058814360.1	hypothetical protein	-
I6J15_RS02425 (I6J15_02425)	-	487580..487777 (-)	198	WP_020915996.1	helix-turn-helix transcriptional regulator	-
I6J15_RS02430 (I6J15_02430)	-	487937..489136 (-)	1200	WP_020915995.1	acetate kinase	-
I6J15_RS02435 (I6J15_02435)	comYH	489190..490146 (-)	957	WP_020915994.1	class I SAM-dependent methyltransferase	Machinery gene
I6J15_RS02440 (I6J15_02440)	comGG	490200..490550 (-)	351	WP_020915993.1	competence type IV pilus minor pilin ComGG	-
I6J15_RS02445 (I6J15_02445)	comYF	490522..490959 (-)	438	WP_043894883.1	competence type IV pilus minor pilin ComGF	Machinery gene
I6J15_RS02450 (I6J15_02450)	comYE	490943..491236 (-)	294	WP_020915991.1	competence type IV pilus minor pilin ComGE	Machinery gene
I6J15_RS02455 (I6J15_02455)	comYD	491190..491621 (-)	432	WP_020915990.1	competence type IV pilus minor pilin ComGD	Machinery gene
I6J15_RS02460 (I6J15_02460)	comYC	491605..491898 (-)	294	WP_020915989.1	competence type IV pilus major pilin ComGC	Machinery gene
I6J15_RS02465 (I6J15_02465)	comYB	491898..492941 (-)	1044	WP_020915988.1	competence type IV pilus assembly protein ComGB	Machinery gene
I6J15_RS02470 (I6J15_02470)	comYA	492865..493806 (-)	942	WP_020915987.1	competence type IV pilus ATPase ComGA	Machinery gene
I6J15_RS02475 (I6J15_02475)	-	493878..494246 (-)	369	WP_020915986.1	DUF1033 family protein	-

Sequence

Protein

• Length: 97 a.a.
• Molecular weight: 11018.16 Da
• Isoelectric Point: 10.1006

>NTDB_id=526667 I6J15_RS02460 WP_020915989.1 491605..491898(-) (comYC) [Streptococcus lutetiensis strain FDAARGOS_1158]
MKNIWKKLRKKSVEAFTLVEMLIVLLIIGVLMLLFVPNLSKQKEVVHEKGDAAVVKVVESQMELYEVKTGKQPTVNDLVK
AEYISKDQAQTYNAAKK

Nucleotide

• Length: 294 bp

>NTDB_id=526667 I6J15_RS02460 WP_020915989.1 491605..491898(-) (comYC) [Streptococcus lutetiensis strain FDAARGOS_1158]
ATGAAAAACATTTGGAAAAAACTACGTAAAAAGTCTGTAGAAGCTTTTACACTTGTGGAGATGTTGATTGTTTTGCTAAT
CATTGGTGTCTTGATGCTGTTATTTGTGCCAAACTTGAGCAAGCAAAAAGAGGTTGTGCATGAAAAAGGAGATGCTGCTG
TTGTCAAAGTTGTCGAAAGTCAGATGGAGCTTTATGAAGTGAAGACAGGTAAACAACCAACTGTAAATGATTTGGTGAAA
GCTGAATATATTTCAAAAGACCAAGCTCAAACATATAATGCGGCTAAAAAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (13-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus gordonii str. Challis substr. CH1	68.539	91.753	0.629
comYC	Streptococcus suis isolate S10	60.87	94.845	0.577
comGC/cglC	Streptococcus mitis SK321	56.989	95.876	0.546
comGC/cglC	Streptococcus pneumoniae Rx1	56.522	94.845	0.536
comGC/cglC	Streptococcus pneumoniae D39	56.522	94.845	0.536
comGC/cglC	Streptococcus pneumoniae R6	56.522	94.845	0.536
comGC/cglC	Streptococcus pneumoniae TIGR4	56.522	94.845	0.536
comGC/cglC	Streptococcus mitis NCTC 12261	56.522	94.845	0.536
comYC	Streptococcus mutans UA140	56.322	89.691	0.505
comYC	Streptococcus mutans UA159	56.322	89.691	0.505
comGC	Lactococcus lactis subsp. cremoris KW2	51.685	91.753	0.474
comGC	Latilactobacillus sakei subsp. sakei 23K	45.57	81.443	0.371