Detailed information NTG0526666

Bioinformatically predicted

Overview

• Name: comYD
• Type: Machinery gene
• Locus tag: I6J15_RS02455
• Genome accession: NZ_CP068056
• Coordinates: 491190..491621 (-)
• Length: 143 a.a.
• NCBI ID: WP_020915990.1
• Uniprot ID: A0AB33AJ27
• Organism: Streptococcus lutetiensis strain FDAARGOS_1158
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 486190..496621

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J15_RS02410 (I6J15_02410)	-	486257..486892 (-)	636	WP_111712559.1	CPBP family intramembrane glutamic endopeptidase	-
I6J15_RS02415 (I6J15_02415)	-	486907..487362 (-)	456	WP_231853254.1	ABC transporter permease	-
I6J15_RS02420 (I6J15_02420)	-	487363..487563 (-)	201	WP_058814360.1	hypothetical protein	-
I6J15_RS02425 (I6J15_02425)	-	487580..487777 (-)	198	WP_020915996.1	helix-turn-helix transcriptional regulator	-
I6J15_RS02430 (I6J15_02430)	-	487937..489136 (-)	1200	WP_020915995.1	acetate kinase	-
I6J15_RS02435 (I6J15_02435)	comYH	489190..490146 (-)	957	WP_020915994.1	class I SAM-dependent methyltransferase	Machinery gene
I6J15_RS02440 (I6J15_02440)	comGG	490200..490550 (-)	351	WP_020915993.1	competence type IV pilus minor pilin ComGG	-
I6J15_RS02445 (I6J15_02445)	comYF	490522..490959 (-)	438	WP_043894883.1	competence type IV pilus minor pilin ComGF	Machinery gene
I6J15_RS02450 (I6J15_02450)	comYE	490943..491236 (-)	294	WP_020915991.1	competence type IV pilus minor pilin ComGE	Machinery gene
I6J15_RS02455 (I6J15_02455)	comYD	491190..491621 (-)	432	WP_020915990.1	competence type IV pilus minor pilin ComGD	Machinery gene
I6J15_RS02460 (I6J15_02460)	comYC	491605..491898 (-)	294	WP_020915989.1	competence type IV pilus major pilin ComGC	Machinery gene
I6J15_RS02465 (I6J15_02465)	comYB	491898..492941 (-)	1044	WP_020915988.1	competence type IV pilus assembly protein ComGB	Machinery gene
I6J15_RS02470 (I6J15_02470)	comYA	492865..493806 (-)	942	WP_020915987.1	competence type IV pilus ATPase ComGA	Machinery gene
I6J15_RS02475 (I6J15_02475)	-	493878..494246 (-)	369	WP_020915986.1	DUF1033 family protein	-

Sequence

Protein

• Length: 143 a.a.
• Molecular weight: 16157.52 Da
• Isoelectric Point: 8.7942

>NTDB_id=526666 I6J15_RS02455 WP_020915990.1 491190..491621(-) (comYD) [Streptococcus lutetiensis strain FDAARGOS_1158]
MRLKNKAFYAFTLIESLLTLAISCFMVIMLSGSVNHIFQSVDETLFFLSFENLYRDTQKLASIKQESQTLQISQDAISNG
ITSVKVPKTVLVDKNYQLVFDKSGGNSSLTKIQFHTENQAIDYQLYIGSGNYKKTETKSLHTP

Nucleotide

• Length: 432 bp

>NTDB_id=526666 I6J15_RS02455 WP_020915990.1 491190..491621(-) (comYD) [Streptococcus lutetiensis strain FDAARGOS_1158]
ATGCGGCTAAAAAATAAAGCTTTTTACGCCTTTACCCTTATCGAAAGTTTGCTGACTTTAGCAATTTCTTGTTTTATGGT
CATCATGCTATCAGGTTCGGTCAATCATATTTTTCAATCGGTCGATGAAACTTTGTTCTTTCTTTCCTTTGAAAATCTTT
ATCGCGATACACAAAAATTGGCTAGTATTAAGCAGGAAAGTCAGACTTTGCAGATATCGCAAGATGCGATTTCAAATGGA
ATCACTAGTGTTAAGGTTCCTAAAACTGTATTGGTTGACAAGAATTATCAGCTTGTTTTTGATAAATCAGGGGGTAATTC
ATCTCTTACCAAGATACAGTTTCATACAGAAAACCAGGCAATCGATTATCAATTGTACATAGGAAGTGGTAACTATAAAA
AAACAGAAACTAAAAGCTTACATACTCCTTGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYD	Streptococcus mutans UA140	54.264	90.21	0.49
comYD	Streptococcus mutans UA159	54.264	90.21	0.49
comYD	Streptococcus gordonii str. Challis substr. CH1	45.185	94.406	0.427
comGD/cglD	Streptococcus pneumoniae Rx1	44.615	90.909	0.406
comGD/cglD	Streptococcus pneumoniae D39	44.615	90.909	0.406
comGD/cglD	Streptococcus pneumoniae R6	44.615	90.909	0.406
comGD/cglD	Streptococcus mitis NCTC 12261	44.615	90.909	0.406
comGD/cglD	Streptococcus pneumoniae TIGR4	43.846	90.909	0.399
comGD/cglD	Streptococcus mitis SK321	43.846	90.909	0.399