Detailed information NTG0506256

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: I6L88_RS08765
• Genome accession: NZ_CP077404
• Coordinates: 1776435..1777526 (+)
• Length: 363 a.a.
• NCBI ID: WP_002264240.1
• Uniprot ID: -
• Organism: Streptococcus mutans strain FDAARGOS 1458
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1771435..1782526

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6L88_RS08740 (I6L88_08740)	pgsA	1771854..1772396 (-)	543	WP_002267084.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
I6L88_RS08745 (I6L88_08745)	-	1772408..1773385 (-)	978	WP_002267085.1	helix-turn-helix domain-containing protein	-
I6L88_RS08750 (I6L88_08750)	-	1773458..1774750 (-)	1293	WP_002264239.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
I6L88_RS08755 (I6L88_08755)	-	1774752..1775999 (-)	1248	WP_002279892.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
I6L88_RS08760 (I6L88_08760)	yaaA	1776067..1776432 (+)	366	WP_002267087.1	S4 domain-containing protein YaaA	-
I6L88_RS08765 (I6L88_08765)	recF	1776435..1777526 (+)	1092	WP_002264240.1	DNA replication/repair protein RecF	Machinery gene
I6L88_RS08770 (I6L88_08770)	guaB	1777689..1779170 (-)	1482	WP_002279893.1	IMP dehydrogenase	-
I6L88_RS08775 (I6L88_08775)	trpS	1779327..1780349 (-)	1023	WP_002264241.1	tryptophan--tRNA ligase	-
I6L88_RS08780 (I6L88_08780)	-	1780783..1782402 (+)	1620	WP_002279894.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 363 a.a.
• Molecular weight: 42042.29 Da
• Isoelectric Point: 9.8334

>NTDB_id=506256 I6L88_RS08765 WP_002264240.1 1776435..1777526(+) (recF) [Streptococcus mutans strain FDAARGOS 1458]
MWIEKINLKHYRNYTAIESEFSQSLNVFVGQNAQGKTNFLEAIYFLSLTRSHRTRSDKELIQFGQKELNVSGLLNRVNGK
IPLEINLSNKGRTTKINYLKQPKLSDYIGTMTVVLFAPEDLQLIKGSPSLRRKFIDIDLGQIKPIYLSDLSNYNHVLKQR
NAYLKSEKKVDTDFLFVLDEQLVDYGSKVIEHRLDFIQNLTKEADKYHFSISNQQEHLKISYLSSVKFDHKKNIRDNFLN
LLQKNRQGDIFKKNTSVGPHRDDLAFFINQMNANFGSQGQHRSLILSLKLAEIELIKTVTGDYPILLLDDVMSELDNYRQ
IKLLEGIKDNVQTFITTTSLEHLQQLPKKLKLFTINQGKVLSE

Nucleotide

• Length: 1092 bp

>NTDB_id=506256 I6L88_RS08765 WP_002264240.1 1776435..1777526(+) (recF) [Streptococcus mutans strain FDAARGOS 1458]
ATGTGGATAGAAAAAATTAATTTAAAACATTATCGCAATTATACAGCCATTGAATCTGAATTTTCCCAAAGTCTTAATGT
TTTTGTGGGACAAAATGCTCAAGGAAAAACCAATTTCCTAGAGGCTATTTATTTTTTATCTTTAACCCGCAGTCATCGAA
CACGATCTGACAAAGAACTTATTCAATTTGGTCAAAAAGAATTAAATGTTTCTGGCCTTCTTAATCGTGTCAATGGCAAA
ATTCCTCTGGAAATCAACTTATCTAATAAAGGCCGAACAACAAAAATAAATTATCTCAAACAACCTAAACTTTCAGACTA
TATTGGAACAATGACTGTTGTTCTCTTTGCTCCAGAAGATCTTCAACTAATAAAAGGCTCCCCAAGTCTCAGAAGAAAGT
TTATTGACATTGATTTAGGACAAATCAAGCCTATTTACTTATCTGATTTATCAAATTATAATCATGTTCTTAAACAACGA
AATGCCTATTTAAAATCAGAGAAGAAGGTTGATACTGATTTTCTTTTCGTTCTAGATGAACAATTGGTAGATTATGGTAG
TAAGGTTATTGAGCATCGCCTTGATTTTATTCAAAATTTAACTAAAGAAGCTGATAAATATCATTTCTCTATTTCAAATC
AACAGGAACATTTAAAAATTTCCTACCTTTCTTCTGTTAAATTTGATCATAAAAAAAATATTCGTGATAACTTTTTAAAC
CTGCTACAAAAAAATCGGCAGGGTGATATTTTCAAAAAGAACACCAGTGTTGGTCCGCACCGCGATGATTTAGCCTTTTT
CATCAATCAAATGAACGCTAACTTTGGTAGTCAAGGACAACATCGCAGCCTTATTTTATCTTTAAAGCTGGCTGAGATTG
AACTTATAAAAACAGTCACTGGGGATTATCCTATTCTCTTGTTAGATGATGTCATGAGTGAACTTGATAATTATAGACAA
ATCAAACTTTTAGAAGGCATCAAAGATAATGTTCAGACCTTTATAACAACAACTAGCCTTGAACATCTTCAACAACTCCC
TAAGAAACTAAAGTTATTTACTATCAACCAAGGAAAAGTGCTATCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-357)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	64.722	99.174	0.642
recF	Bacillus subtilis subsp. subtilis str. 168	43.902	100	0.446