Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | IAE60_RS18355 | Genome accession | NZ_CP060731 |
| Coordinates | 3908582..3908998 (+) | Length | 138 a.a. |
| NCBI ID | WP_187573329.1 | Uniprot ID | A0A7G9TCJ4 |
| Organism | Pseudoxanthomonas mexicana strain GTZY2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3903582..3913998
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IAE60_RS18330 (IAE60_18330) | pilR | 3903886..3905286 (+) | 1401 | WP_187573325.1 | sigma-54 dependent transcriptional regulator | Regulator |
| IAE60_RS18335 (IAE60_18335) | - | 3905303..3905902 (-) | 600 | WP_187573326.1 | methyltransferase domain-containing protein | - |
| IAE60_RS18340 (IAE60_18340) | - | 3905899..3906927 (-) | 1029 | WP_187574812.1 | glycosyltransferase family 2 protein | - |
| IAE60_RS18345 (IAE60_18345) | - | 3906969..3907763 (-) | 795 | WP_187573327.1 | glycosyltransferase family 2 protein | - |
| IAE60_RS18350 (IAE60_18350) | - | 3907760..3908140 (-) | 381 | WP_187573328.1 | hypothetical protein | - |
| IAE60_RS18355 (IAE60_18355) | pilA2 | 3908582..3908998 (+) | 417 | WP_187573329.1 | pilin | Machinery gene |
| IAE60_RS18360 (IAE60_18360) | - | 3909063..3911030 (+) | 1968 | WP_187573330.1 | hypothetical protein | - |
| IAE60_RS18365 (IAE60_18365) | - | 3911027..3912976 (+) | 1950 | WP_187573331.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 138 a.a. Molecular weight: 14096.26 Da Isoelectric Point: 7.5880
>NTDB_id=478153 IAE60_RS18355 WP_187573329.1 3908582..3908998(+) (pilA2) [Pseudoxanthomonas mexicana strain GTZY2]
MKKNMQGFTLIELMIVIAILGILLAIAIPAYQDYLARARAAEGLNMAAPAKLAVSEAVLGSANGTTLPADANAAGYNPAT
STYVQSIAIANGIITITTQSTGCPGTSPVFTLTPTVSTGKVQWTCTSSNDACSPASCR
MKKNMQGFTLIELMIVIAILGILLAIAIPAYQDYLARARAAEGLNMAAPAKLAVSEAVLGSANGTTLPADANAAGYNPAT
STYVQSIAIANGIITITTQSTGCPGTSPVFTLTPTVSTGKVQWTCTSSNDACSPASCR
Nucleotide
Download Length: 417 bp
>NTDB_id=478153 IAE60_RS18355 WP_187573329.1 3908582..3908998(+) (pilA2) [Pseudoxanthomonas mexicana strain GTZY2]
ATGAAGAAGAACATGCAGGGCTTCACCCTGATCGAACTGATGATCGTCATCGCCATCCTGGGCATCCTGCTGGCCATCGC
CATTCCGGCCTATCAGGACTACCTGGCCCGCGCCCGCGCCGCCGAAGGCCTGAACATGGCCGCCCCGGCCAAGCTGGCCG
TGTCGGAAGCCGTCCTGGGCAGCGCCAACGGCACCACTCTCCCGGCCGACGCCAACGCCGCCGGTTACAACCCGGCCACG
TCCACCTACGTGCAGAGCATCGCCATCGCCAACGGCATCATCACCATCACCACGCAGAGCACCGGCTGCCCGGGCACCAG
CCCGGTCTTCACGCTGACCCCGACCGTCAGCACCGGCAAGGTCCAGTGGACCTGCACCTCGAGCAACGACGCCTGCTCGC
CGGCCAGCTGCCGCTAA
ATGAAGAAGAACATGCAGGGCTTCACCCTGATCGAACTGATGATCGTCATCGCCATCCTGGGCATCCTGCTGGCCATCGC
CATTCCGGCCTATCAGGACTACCTGGCCCGCGCCCGCGCCGCCGAAGGCCTGAACATGGCCGCCCCGGCCAAGCTGGCCG
TGTCGGAAGCCGTCCTGGGCAGCGCCAACGGCACCACTCTCCCGGCCGACGCCAACGCCGCCGGTTACAACCCGGCCACG
TCCACCTACGTGCAGAGCATCGCCATCGCCAACGGCATCATCACCATCACCACGCAGAGCACCGGCTGCCCGGGCACCAG
CCCGGTCTTCACGCTGACCCCGACCGTCAGCACCGGCAAGGTCCAGTGGACCTGCACCTCGAGCAACGACGCCTGCTCGC
CGGCCAGCTGCCGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila strain ERS1305867 |
54.286 |
100 |
0.551 |
| pilA2 | Legionella pneumophila str. Paris |
53.571 |
100 |
0.543 |
| comP | Acinetobacter baylyi ADP1 |
44.898 |
100 |
0.478 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
40 |
100 |
0.435 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
41.549 |
100 |
0.428 |
| pilA | Pseudomonas aeruginosa PAK |
39.189 |
100 |
0.42 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
40 |
100 |
0.406 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
42.857 |
91.304 |
0.391 |
| pilE | Neisseria gonorrhoeae MS11 |
41.732 |
92.029 |
0.384 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
39.683 |
91.304 |
0.362 |
| pilA | Haemophilus influenzae 86-028NP |
37.313 |
97.101 |
0.362 |