Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | H7X60_RS05180 | Genome accession | NZ_CP060266 |
| Coordinates | 1028810..1029235 (-) | Length | 141 a.a. |
| NCBI ID | WP_011285575.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain SP1450 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1023810..1034235
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7X60_RS05130 (H7X60_05105) | - | 1024738..1025172 (-) | 435 | WP_011054810.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
| H7X60_RS05135 (H7X60_05110) | - | 1025458..1025724 (-) | 267 | WP_011018131.1 | hypothetical protein | - |
| H7X60_RS05140 (H7X60_05115) | - | 1025721..1026245 (-) | 525 | WP_011285572.1 | DUF1642 domain-containing protein | - |
| H7X60_RS05145 (H7X60_05120) | - | 1026248..1026880 (-) | 633 | WP_011018133.1 | N-6 DNA methylase | - |
| H7X60_RS05150 (H7X60_05125) | - | 1026882..1027166 (-) | 285 | WP_011018134.1 | hypothetical protein | - |
| H7X60_RS05155 (H7X60_05130) | - | 1027163..1027333 (-) | 171 | WP_002995952.1 | hypothetical protein | - |
| H7X60_RS05160 (H7X60_05135) | - | 1027330..1027566 (-) | 237 | WP_002995955.1 | DUF3310 domain-containing protein | - |
| H7X60_RS09180 | - | 1027566..1027811 (-) | 246 | WP_011285573.1 | hypothetical protein | - |
| H7X60_RS05165 (H7X60_05140) | - | 1027808..1028164 (-) | 357 | WP_011284873.1 | hypothetical protein | - |
| H7X60_RS05170 (H7X60_05145) | - | 1028161..1028601 (-) | 441 | WP_011285574.1 | RusA family crossover junction endodeoxyribonuclease | - |
| H7X60_RS05175 (H7X60_05150) | - | 1028601..1028804 (-) | 204 | WP_011106686.1 | hypothetical protein | - |
| H7X60_RS05180 (H7X60_05155) | ssb | 1028810..1029235 (-) | 426 | WP_011285575.1 | single-stranded DNA-binding protein | Machinery gene |
| H7X60_RS05185 (H7X60_05160) | - | 1029228..1029902 (-) | 675 | WP_011285576.1 | ERF family protein | - |
| H7X60_RS05190 (H7X60_05165) | - | 1029903..1030385 (-) | 483 | WP_011285577.1 | siphovirus Gp157 family protein | - |
| H7X60_RS05195 (H7X60_05170) | - | 1030407..1030661 (-) | 255 | WP_011285578.1 | hypothetical protein | - |
| H7X60_RS05200 (H7X60_05175) | - | 1030642..1030995 (-) | 354 | WP_011285579.1 | hypothetical protein | - |
| H7X60_RS05205 (H7X60_05180) | - | 1031136..1031918 (-) | 783 | WP_011285581.1 | ATP-binding protein | - |
| H7X60_RS05210 (H7X60_05185) | - | 1031905..1032735 (-) | 831 | WP_009881060.1 | phage replisome organizer N-terminal domain-containing protein | - |
| H7X60_RS05215 | - | 1032749..1032937 (-) | 189 | Protein_997 | XRE family transcriptional regulator | - |
| H7X60_RS05220 | - | 1033171..1033410 (+) | 240 | WP_227874181.1 | hypothetical protein | - |
| H7X60_RS05225 (H7X60_05195) | - | 1033541..1033750 (+) | 210 | WP_011017885.1 | hypothetical protein | - |
| H7X60_RS05230 (H7X60_05200) | - | 1033860..1034060 (-) | 201 | WP_002992770.1 | helix-turn-helix domain-containing protein | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15995.63 Da Isoelectric Point: 4.5748
>NTDB_id=474833 H7X60_RS05180 WP_011285575.1 1028810..1029235(-) (ssb) [Streptococcus pyogenes strain SP1450]
MINNIVLVGRMTKDAELRYTASQVAVATFTLAVNRRFKEQNGEREADFINCVIWRQSAENLANWAKKGALIGVTGRIQTR
NYENQQEQRVYVTEVVAESFQMLESRNSQQQSGQDNSSQNDNSQPFGNSNPMDISDDDLPF
MINNIVLVGRMTKDAELRYTASQVAVATFTLAVNRRFKEQNGEREADFINCVIWRQSAENLANWAKKGALIGVTGRIQTR
NYENQQEQRVYVTEVVAESFQMLESRNSQQQSGQDNSSQNDNSQPFGNSNPMDISDDDLPF
Nucleotide
Download Length: 426 bp
>NTDB_id=474833 H7X60_RS05180 WP_011285575.1 1028810..1029235(-) (ssb) [Streptococcus pyogenes strain SP1450]
ATGATTAACAACATTGTGCTAGTTGGTCGCATGACCAAGGACGCAGAGCTTCGCTATACAGCGAGTCAAGTAGCTGTAGC
TACGTTCACACTTGCGGTAAACCGCAGATTTAAAGAGCAAAACGGGGAGAGAGAAGCAGATTTCATTAACTGTGTTATCT
GGCGACAGTCTGCTGAAAATTTAGCCAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGAACAACGTGTCTATGTGACGGAAGTTGTTGCAGAGAGTTTCCAAATGTTGGAAAGTCGAAA
TAGCCAGCAACAATCTGGTCAAGATAACTCTTCGCAAAACGATAACAGTCAACCGTTTGGCAATTCAAACCCAATGGATA
TTTCAGACGATGATCTGCCGTTTTAA
ATGATTAACAACATTGTGCTAGTTGGTCGCATGACCAAGGACGCAGAGCTTCGCTATACAGCGAGTCAAGTAGCTGTAGC
TACGTTCACACTTGCGGTAAACCGCAGATTTAAAGAGCAAAACGGGGAGAGAGAAGCAGATTTCATTAACTGTGTTATCT
GGCGACAGTCTGCTGAAAATTTAGCCAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGAACAACGTGTCTATGTGACGGAAGTTGTTGCAGAGAGTTTCCAAATGTTGGAAAGTCGAAA
TAGCCAGCAACAATCTGGTCAAGATAACTCTTCGCAAAACGATAACAGTCAACCGTTTGGCAATTCAAACCCAATGGATA
TTTCAGACGATGATCTGCCGTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
55.294 |
100 |
0.667 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
54.07 |
100 |
0.66 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
43.972 |
100 |
0.44 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
43.262 |
100 |
0.433 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
43.262 |
100 |
0.433 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
43.262 |
100 |
0.433 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
43.262 |
100 |
0.433 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
43.262 |
100 |
0.433 |
| ssbB/cilA | Streptococcus mitis SK321 |
43.262 |
100 |
0.433 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
51.786 |
79.433 |
0.411 |
| ssbA | Streptococcus mutans UA159 |
40.426 |
100 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
29.379 |
100 |
0.369 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
49.524 |
74.468 |
0.369 |