Detailed information NTG0447236

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: GE022_RS08875
• Genome accession: NZ_CP053790
• Coordinates: 1823889..1824938 (-)
• Length: 349 a.a.
• NCBI ID: WP_159305284.1
• Uniprot ID: -
• Organism: Streptococcus canis strain HL_77_2
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1818889..1829938

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GE022_RS08850 (GE022_008840)	rimI	1819453..1819878 (-)	426	WP_003045251.1	ribosomal protein S18-alanine N-acetyltransferase	-
GE022_RS08855 (GE022_008845)	tsaB	1819880..1820578 (-)	699	WP_164405132.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
GE022_RS08860 (GE022_008850)	-	1820863..1821093 (+)	231	WP_003045256.1	DNA-dependent RNA polymerase subunit epsilon	-
GE022_RS08865 (GE022_008855)	rnjA	1821095..1822777 (+)	1683	WP_125074144.1	ribonuclease J1	-
GE022_RS08870 (GE022_008860)	amiF	1822960..1823892 (-)	933	WP_159305283.1	ABC transporter ATP-binding protein	Regulator
GE022_RS08875 (GE022_008865)	oppD	1823889..1824938 (-)	1050	WP_159305284.1	ABC transporter ATP-binding protein	Regulator
GE022_RS08880 (GE022_008870)	-	1824950..1825981 (-)	1032	WP_093999474.1	ABC transporter permease	-
GE022_RS08885 (GE022_008875)	-	1825991..1826905 (-)	915	WP_164405190.1	ABC transporter permease	-
GE022_RS10865	-	1827143..1827586 (+)	444	Protein_1711	transposase	-
GE022_RS08890 (GE022_008880)	-	1827889..1829544 (-)	1656	WP_164405428.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 38621.46 Da
• Isoelectric Point: 7.6020

>NTDB_id=447236 GE022_RS08875 WP_159305284.1 1823889..1824938(-) (oppD) [Streptococcus canis strain HL_77_2]
MTSETILSVKRLHVDFKTYAGDVKAIRDISFDLKKGETLAIVGESGSGKSVTTRTLMGLNAKNARLSGEIDFKGKKLNTL
TEDEWVKVRGNDIAMIFQDPMTSLDPTMKIGLQIAETILIHEKINKQEALNRALELMRQVGIPNAKEHVNDYPHQWSGGM
RQRAVIAIALAANPEILIADEPTTALDVTIQAQILRLMKEIQKQTQSSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYNPQHPYTWGLLNSMPTTDIASGSLASIPGTPPDLLNPPKGDAFAARNAFALDIDHVEAPPMFKVSETHYAATWLL
DERAPKVTPPAQIQKRWAKWQKREGRQAK

Nucleotide

• Length: 1050 bp

>NTDB_id=447236 GE022_RS08875 WP_159305284.1 1823889..1824938(-) (oppD) [Streptococcus canis strain HL_77_2]
ATGACAAGTGAAACGATTTTAAGCGTTAAAAGACTCCACGTTGATTTTAAAACTTATGCAGGAGATGTGAAGGCGATTCG
CGATATTAGTTTTGACCTTAAAAAAGGGGAAACCCTTGCGATTGTTGGCGAATCTGGTTCAGGGAAATCAGTGACCACTA
GAACCTTGATGGGCTTAAATGCTAAAAATGCTAGGTTATCAGGAGAAATTGATTTTAAAGGGAAAAAACTAAATACCTTG
ACAGAAGACGAATGGGTCAAGGTACGCGGTAATGACATTGCCATGATTTTCCAAGATCCAATGACCAGTCTTGACCCAAC
CATGAAAATTGGGTTGCAGATTGCTGAAACGATTTTAATCCACGAAAAGATTAATAAGCAAGAAGCCTTAAACCGTGCTC
TTGAATTGATGCGTCAGGTAGGTATTCCAAATGCCAAAGAGCATGTCAATGATTACCCACATCAGTGGTCAGGAGGGATG
CGTCAACGGGCTGTGATTGCCATTGCTCTTGCGGCTAATCCTGAAATTCTCATTGCTGATGAGCCGACCACAGCTCTTGA
TGTGACCATTCAGGCACAGATTTTAAGGTTAATGAAAGAGATTCAAAAGCAAACCCAATCGTCTATTATTTTTATTACCC
ATGATCTCGGTGTTGTAGCAGGAATGGCTGACCGTGTAGCGGTGATGTATGCTGGAAAAATCGTTGAATATGGAACAGTT
GACGAAGTCTTCTATAACCCACAACACCCTTACACTTGGGGATTACTCAACTCCATGCCAACGACAGATATTGCTTCAGG
GAGTTTAGCATCTATTCCAGGAACGCCCCCTGACTTGCTCAATCCTCCTAAGGGGGATGCTTTTGCAGCCCGCAATGCAT
TTGCCTTGGATATTGATCATGTGGAGGCTCCCCCCATGTTTAAGGTCAGCGAGACCCATTACGCTGCAACTTGGTTATTA
GACGAGCGAGCACCAAAAGTAACTCCGCCAGCTCAAATTCAAAAACGCTGGGCTAAGTGGCAAAAACGAGAAGGGAGACA
AGCTAAATGA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	79.251	99.427	0.788
amiE	Streptococcus salivarius strain HSISS4	55.102	98.281	0.542
amiE	Streptococcus thermophilus LMG 18311	56.325	95.129	0.536
amiE	Streptococcus thermophilus LMD-9	56.325	95.129	0.536