Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | NLA_RS00960 | Genome accession | NC_014752 |
| Coordinates | 182171..182617 (-) | Length | 148 a.a. |
| NCBI ID | WP_013448269.1 | Uniprot ID | E4ZAF9 |
| Organism | Neisseria lactamica 020-06 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 177171..187617
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLA_RS13060 | - | 177408..177635 (-) | 228 | WP_042508111.1 | hypothetical protein | - |
| NLA_RS00945 (NLA_1750) | - | 177675..178547 (+) | 873 | WP_013448266.1 | mechanosensitive ion channel family protein | - |
| NLA_RS00950 (NLA_1760) | - | 178635..180671 (+) | 2037 | WP_013448267.1 | M3 family metallopeptidase | - |
| NLA_RS00955 (NLA_1770) | - | 181096..181662 (-) | 567 | WP_013448268.1 | manganese efflux pump MntP family protein | - |
| NLA_RS00960 (NLA_1780) | pilE | 182171..182617 (-) | 447 | WP_013448269.1 | pilin | Machinery gene |
| NLA_RS13065 | - | 183467..183631 (+) | 165 | WP_155270588.1 | hypothetical protein | - |
| NLA_RS13250 | - | 183701..183889 (-) | 189 | WP_162467539.1 | hypothetical protein | - |
| NLA_RS00970 (NLA_1790) | katA | 183966..185480 (-) | 1515 | WP_013448270.1 | catalase KatA | - |
| NLA_RS00975 (NLA_1800) | rpoN | 185829..187172 (+) | 1344 | WP_042508291.1 | RNA polymerase factor sigma-54 | - |
Sequence
Protein
Download Length: 148 a.a. Molecular weight: 15448.74 Da Isoelectric Point: 8.9718
>NTDB_id=39050 NLA_RS00960 WP_013448269.1 182171..182617(-) (pilE) [Neisseria lactamica 020-06]
MKAIQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQMSEALTLAEGQKAAVVEYYSDNGTFPAQNASAGIATASAIT
GKYVAKVEVTGDATSATITSTMKSSGVNNDIKGKTLVLVGKQNSGSFSWECKKGTVDDKFLPSSCRAK
MKAIQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQMSEALTLAEGQKAAVVEYYSDNGTFPAQNASAGIATASAIT
GKYVAKVEVTGDATSATITSTMKSSGVNNDIKGKTLVLVGKQNSGSFSWECKKGTVDDKFLPSSCRAK
Nucleotide
Download Length: 447 bp
>NTDB_id=39050 NLA_RS00960 WP_013448269.1 182171..182617(-) (pilE) [Neisseria lactamica 020-06]
ATGAAAGCAATCCAAAAAGGTTTCACCCTGATCGAGCTGATGATCGTCATCGCCATCGTCGGTATCTTGGCAGCCGTCGC
CCTGCCCGCATACCAAGACTACACCGCGCGCGCCCAAATGTCCGAAGCCCTGACTTTGGCTGAAGGTCAAAAAGCCGCAG
TGGTCGAGTATTATTCCGACAACGGTACATTCCCTGCCCAAAATGCCTCTGCAGGTATTGCTACTGCTTCTGCAATTACA
GGTAAATATGTGGCTAAAGTAGAAGTTACAGGTGATGCTACCTCTGCCACCATTACCTCTACTATGAAATCTTCCGGTGT
AAATAACGACATCAAAGGTAAAACTTTGGTACTCGTCGGCAAACAAAACTCCGGCTCGTTCTCTTGGGAATGTAAAAAAG
GTACTGTGGACGACAAATTCCTGCCGTCTTCCTGCCGCGCCAAATAA
ATGAAAGCAATCCAAAAAGGTTTCACCCTGATCGAGCTGATGATCGTCATCGCCATCGTCGGTATCTTGGCAGCCGTCGC
CCTGCCCGCATACCAAGACTACACCGCGCGCGCCCAAATGTCCGAAGCCCTGACTTTGGCTGAAGGTCAAAAAGCCGCAG
TGGTCGAGTATTATTCCGACAACGGTACATTCCCTGCCCAAAATGCCTCTGCAGGTATTGCTACTGCTTCTGCAATTACA
GGTAAATATGTGGCTAAAGTAGAAGTTACAGGTGATGCTACCTCTGCCACCATTACCTCTACTATGAAATCTTCCGGTGT
AAATAACGACATCAAAGGTAAAACTTTGGTACTCGTCGGCAAACAAAACTCCGGCTCGTTCTCTTGGGAATGTAAAAAAG
GTACTGTGGACGACAAATTCCTGCCGTCTTCCTGCCGCGCCAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae MS11 |
57.576 |
100 |
0.642 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
56.79 |
100 |
0.622 |
| pilA/pilA1 | Eikenella corrodens VA1 |
43.125 |
100 |
0.466 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
35.979 |
100 |
0.459 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
38.69 |
100 |
0.439 |
| pilA2 | Legionella pneumophila str. Paris |
44.366 |
95.946 |
0.426 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
43.662 |
95.946 |
0.419 |
| comP | Acinetobacter baylyi ADP1 |
41.216 |
100 |
0.412 |
| pilA | Pseudomonas aeruginosa PAK |
37.662 |
100 |
0.392 |
| pilA | Acinetobacter baumannii strain A118 |
37.838 |
100 |
0.378 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
36.986 |
98.649 |
0.365 |
| pilA | Acinetobacter nosocomialis M2 |
47.368 |
77.027 |
0.365 |