Detailed information    

insolico Bioinformatically predicted

Overview


Name   comE/blpR   Type   Regulator
Locus tag   FSA31_RS08650 Genome accession   NZ_CP044492
Coordinates   1727914..1728666 (-) Length   250 a.a.
NCBI ID   WP_002284745.1    Uniprot ID   -
Organism   Streptococcus mutans strain T8     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 1722914..1733666
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA31_RS08615 (FSA31_1706) - 1723540..1723683 (-) 144 WP_002263740.1 hypothetical protein -
  FSA31_RS08625 (FSA31_1707) - 1723975..1724997 (-) 1023 WP_002284748.1 thioredoxin family protein -
  FSA31_RS08630 (FSA31_1708) - 1725478..1725666 (-) 189 WP_002284747.1 Blp family class II bacteriocin -
  FSA31_RS08635 (FSA31_1709) - 1725834..1726043 (-) 210 WP_002268232.1 Blp family class II bacteriocin -
  FSA31_RS08640 (FSA31_1710) comC/blpC 1726310..1726450 (+) 141 WP_002270250.1 ComC/BlpC family leader-containing pheromone/bacteriocin Regulator
  FSA31_RS08645 (FSA31_1711) comD/blpH 1726592..1727917 (-) 1326 WP_002284746.1 GHKL domain-containing protein Regulator
  FSA31_RS08650 (FSA31_1712) comE/blpR 1727914..1728666 (-) 753 WP_002284745.1 response regulator transcription factor Regulator
  FSA31_RS08655 (FSA31_1713) - 1729131..1729769 (-) 639 WP_002262115.1 VTT domain-containing protein -
  FSA31_RS08660 (FSA31_1714) - 1729817..1730443 (-) 627 WP_002268642.1 hypothetical protein -
  FSA31_RS08665 (FSA31_1715) der 1730518..1731828 (-) 1311 WP_002262117.1 ribosome biogenesis GTPase Der -
  FSA31_RS08670 (FSA31_1716) dnaI 1731841..1732740 (-) 900 WP_002284744.1 primosomal protein DnaI -

Sequence


Protein


Download         Length: 250 a.a.        Molecular weight: 29335.67 Da        Isoelectric Point: 8.2551

>NTDB_id=390319 FSA31_RS08650 WP_002284745.1 1727914..1728666(-) (comE/blpR) [Streptococcus mutans strain T8]
MISIFVLEDDFLQQGRLETTIAAIMKEKNWSYKELTIFGKTQQLIDAIPEKGSHQIFFLDIEIKKEEKKGLEVANQIRQH
NPSAVIVFVTTHSEFMPLTFQYQVSALDFIDKSLNPEEFSHRIESALYYAMENSQKNGQSEELFIFHSSETQFQVPFAEI
LYFETSSTAHKLCLYTYDERIEFYGSMTDIVKMDKRLFQCHRSFIVNPANITRIDRKKRLAYFRNNKSCLISRTKLTKLR
AVIADQRRAK

Nucleotide


Download         Length: 753 bp        

>NTDB_id=390319 FSA31_RS08650 WP_002284745.1 1727914..1728666(-) (comE/blpR) [Streptococcus mutans strain T8]
ATGATTTCTATTTTTGTATTGGAAGATGATTTTTTACAGCAAGGACGTCTTGAAACCACCATTGCAGCTATCATGAAAGA
AAAAAATTGGTCTTATAAAGAATTGACTATTTTTGGAAAAACACAACAACTTATTGACGCTATCCCTGAAAAGGGCAGTC
ACCAGATTTTCTTTTTGGATATTGAAATCAAAAAAGAGGAAAAGAAAGGACTGGAAGTAGCCAATCAGATTAGACAGCAT
AATCCTAGTGCGGTTATTGTCTTTGTCACGACACATTCTGAGTTTATGCCCCTCACTTTTCAGTATCAGGTATCTGCTTT
GGATTTTATTGATAAATCTTTGAATCCTGAGGAGTTCTCCCACCGCATTGAATCAGCGCTGTATTATGCTATGGAAAACA
GCCAGAAGAATGGTCAATCAGAGGAACTTTTTATTTTCCATTCATCTGAAACTCAGTTTCAGGTCCCTTTTGCTGAGATT
CTGTATTTTGAAACATCTTCAACAGCCCATAAGCTCTGCCTTTATACTTATGATGAACGGATTGAATTTTATGGTAGTAT
GACTGACATTGTTAAAATGGATAAGAGACTTTTTCAGTGCCATCGCTCTTTTATTGTCAATCCTGCCAATATTACCCGTA
TTGATCGGAAAAAGCGATTGGCCTATTTTCGAAATAATAAGTCTTGTCTTATTTCACGAACTAAGTTAACAAAACTGAGA
GCTGTGATTGCTGATCAAAGGAGAGCAAAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

99.2

100

0.992

  comE/comE1 Streptococcus equinus JB1

46.473

96.4

0.448

  comE Streptococcus mitis NCTC 12261

41.7

98.8

0.412

  comE Streptococcus infantis strain Atu-4

41.7

98.8

0.412

  comE Streptococcus pneumoniae D39

41.296

98.8

0.408

  comE Streptococcus pneumoniae Rx1

41.296

98.8

0.408

  comE Streptococcus pneumoniae R6

41.296

98.8

0.408

  comE Streptococcus pneumoniae TIGR4

41.296

98.8

0.408

  comE Streptococcus mitis SK321

41.296

98.8

0.408

  comE/comE2 Streptococcus equinus JB1

40.249

96.4

0.388

  comE/comE1 Streptococcus gordonii str. Challis substr. CH1

37.551

98

0.368

  comE/comE2 Streptococcus gordonii strain NCTC7865

37.551

98

0.368


Multiple sequence alignment