Detailed information
Bioinformatically predicted
Overview
| Name | comE1/comEA | Type | Machinery gene |
| Locus tag | FOB40_RS18370 | Genome accession | NZ_CP044060 |
| Coordinates | 3990855..3991175 (-) | Length | 106 a.a. |
| NCBI ID | WP_150390290.1 | Uniprot ID | - |
| Organism | Aeromonas veronii strain FDAARGOS_632 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3985855..3996175
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOB40_RS18350 (FOB40_18355) | - | 3986252..3986950 (-) | 699 | WP_150390289.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| FOB40_RS18355 (FOB40_18360) | - | 3987191..3988162 (+) | 972 | WP_069526605.1 | response regulator | - |
| FOB40_RS18360 (FOB40_18365) | - | 3988237..3989634 (-) | 1398 | WP_047436211.1 | peptide MFS transporter | - |
| FOB40_RS18365 (FOB40_18370) | galU | 3989848..3990759 (-) | 912 | WP_139405564.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| FOB40_RS18370 (FOB40_18375) | comE1/comEA | 3990855..3991175 (-) | 321 | WP_150390290.1 | ComEA family DNA-binding protein | Machinery gene |
| FOB40_RS18375 (FOB40_18380) | pta | 3991553..3993733 (-) | 2181 | WP_005339119.1 | phosphate acetyltransferase | - |
| FOB40_RS18380 (FOB40_18385) | - | 3993788..3994990 (-) | 1203 | WP_150390291.1 | acetate kinase | - |
| FOB40_RS18385 (FOB40_18390) | yfbV | 3995295..3995735 (+) | 441 | WP_005339116.1 | terminus macrodomain insulation protein YfbV | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11262.21 Da Isoelectric Point: 9.9853
>NTDB_id=387274 FOB40_RS18370 WP_150390290.1 3990855..3991175(-) (comE1/comEA) [Aeromonas veronii strain FDAARGOS_632]
MLMKKLSAVMLLTCLPLFSQPALAADKAAPKQTTTTSVAKESGKLNINTATLAELTSLKGIGDKKAQAIVDYREKQGKFT
SVDQLADVNGIGPATLEANRDMIIVK
MLMKKLSAVMLLTCLPLFSQPALAADKAAPKQTTTTSVAKESGKLNINTATLAELTSLKGIGDKKAQAIVDYREKQGKFT
SVDQLADVNGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=387274 FOB40_RS18370 WP_150390290.1 3990855..3991175(-) (comE1/comEA) [Aeromonas veronii strain FDAARGOS_632]
ATGCTGATGAAGAAGCTCTCTGCAGTCATGCTGCTGACCTGCTTGCCACTGTTCAGCCAACCCGCGTTGGCCGCAGATAA
GGCAGCGCCCAAGCAAACAACCACAACCTCGGTTGCCAAGGAGTCCGGCAAGCTGAATATCAATACCGCCACCCTTGCCG
AACTCACCAGCCTGAAAGGGATTGGTGACAAGAAGGCACAAGCCATCGTCGACTATCGGGAAAAACAGGGAAAGTTCACC
TCGGTCGATCAGCTGGCGGATGTCAATGGCATTGGCCCGGCCACGCTGGAAGCCAACAGGGACATGATAATAGTCAAATA
A
ATGCTGATGAAGAAGCTCTCTGCAGTCATGCTGCTGACCTGCTTGCCACTGTTCAGCCAACCCGCGTTGGCCGCAGATAA
GGCAGCGCCCAAGCAAACAACCACAACCTCGGTTGCCAAGGAGTCCGGCAAGCTGAATATCAATACCGCCACCCTTGCCG
AACTCACCAGCCTGAAAGGGATTGGTGACAAGAAGGCACAAGCCATCGTCGACTATCGGGAAAAACAGGGAAAGTTCACC
TCGGTCGATCAGCTGGCGGATGTCAATGGCATTGGCCCGGCCACGCTGGAAGCCAACAGGGACATGATAATAGTCAAATA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE1/comEA | Haemophilus influenzae Rd KW20 |
48.214 |
100 |
0.509 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
46.018 |
100 |
0.491 |
| comEA | Vibrio cholerae C6706 |
46.602 |
97.17 |
0.453 |
| comEA | Vibrio cholerae strain A1552 |
46.602 |
97.17 |
0.453 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
44.33 |
91.509 |
0.406 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
43.617 |
88.679 |
0.387 |
| comEA/celA/cilE | Streptococcus pneumoniae Rx1 |
46.429 |
79.245 |
0.368 |
| comEA/celA/cilE | Streptococcus pneumoniae D39 |
46.429 |
79.245 |
0.368 |
| comEA/celA/cilE | Streptococcus pneumoniae R6 |
46.429 |
79.245 |
0.368 |
| comEA/celA/cilE | Streptococcus pneumoniae TIGR4 |
46.429 |
79.245 |
0.368 |
| comEA | Acinetobacter baylyi ADP1 |
51.316 |
71.698 |
0.368 |
| comEA | Vibrio campbellii strain DS40M4 |
37.143 |
99.057 |
0.368 |
| comEA | Legionella pneumophila str. Paris |
39.394 |
93.396 |
0.368 |
| comEA | Legionella pneumophila strain ERS1305867 |
39.394 |
93.396 |
0.368 |