Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | FNL97_RS01455 | Genome accession | NZ_CP041632 |
| Coordinates | 291683..292027 (+) | Length | 114 a.a. |
| NCBI ID | WP_015865176.1 | Uniprot ID | A0A6G9J011 |
| Organism | Geobacillus sp. E263 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 286683..297027
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNL97_RS01430 | - | 287244..287678 (+) | 435 | WP_062677832.1 | DUF1284 domain-containing protein | - |
| FNL97_RS01435 | - | 287809..289185 (+) | 1377 | WP_062677831.1 | aspartate kinase | - |
| FNL97_RS01440 | - | 289318..290283 (+) | 966 | WP_015865179.1 | processed acidic surface protein | - |
| FNL97_RS01445 | - | 290289..290891 (+) | 603 | WP_015865178.1 | class D sortase | - |
| FNL97_RS01450 | - | 290902..291348 (-) | 447 | WP_015865177.1 | YwpF-like family protein | - |
| FNL97_RS01455 | ssbB | 291683..292027 (+) | 345 | WP_015865176.1 | single-stranded DNA-binding protein | Machinery gene |
| FNL97_RS01460 | - | 292201..292608 (-) | 408 | WP_171698742.1 | helix-turn-helix transcriptional regulator | - |
| FNL97_RS01465 | - | 292826..293326 (+) | 501 | WP_143414878.1 | hypothetical protein | - |
| FNL97_RS01470 | - | 293854..295221 (+) | 1368 | WP_205729482.1 | peptidoglycan-binding protein | - |
| FNL97_RS01475 | wecB | 295611..296756 (+) | 1146 | WP_143414879.1 | UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) | - |
Sequence
Protein
Download Length: 114 a.a. Molecular weight: 12796.58 Da Isoelectric Point: 9.0691
>NTDB_id=372606 FNL97_RS01455 WP_015865176.1 291683..292027(+) (ssbB) [Geobacillus sp. E263]
MINQVVLVGRLTKDPELRYTADGAAVANITLAVTRNFRNAEGGIDTDFVQCTLWRKVAENTANYCRKGSIIGVMGRIQTR
NYEKKDGQRVYVTEVVAESVRFMGGKTNEWIEHA
MINQVVLVGRLTKDPELRYTADGAAVANITLAVTRNFRNAEGGIDTDFVQCTLWRKVAENTANYCRKGSIIGVMGRIQTR
NYEKKDGQRVYVTEVVAESVRFMGGKTNEWIEHA
Nucleotide
Download Length: 345 bp
>NTDB_id=372606 FNL97_RS01455 WP_015865176.1 291683..292027(+) (ssbB) [Geobacillus sp. E263]
ATGATTAATCAAGTCGTGCTCGTCGGCCGGTTGACAAAAGATCCGGAACTTCGATATACCGCCGATGGAGCAGCAGTCGC
TAACATTACGTTAGCGGTAACAAGAAATTTTCGCAATGCGGAAGGGGGAATTGATACCGATTTCGTTCAATGTACACTTT
GGCGGAAAGTGGCGGAGAATACAGCCAATTACTGCCGGAAAGGTTCGATTATTGGCGTCATGGGGCGGATTCAGACAAGA
AACTATGAAAAGAAAGATGGGCAACGAGTATACGTGACAGAAGTAGTGGCTGAATCCGTGCGGTTTATGGGCGGCAAAAC
GAATGAATGGATCGAACATGCGTAA
ATGATTAATCAAGTCGTGCTCGTCGGCCGGTTGACAAAAGATCCGGAACTTCGATATACCGCCGATGGAGCAGCAGTCGC
TAACATTACGTTAGCGGTAACAAGAAATTTTCGCAATGCGGAAGGGGGAATTGATACCGATTTCGTTCAATGTACACTTT
GGCGGAAAGTGGCGGAGAATACAGCCAATTACTGCCGGAAAGGTTCGATTATTGGCGTCATGGGGCGGATTCAGACAAGA
AACTATGAAAAGAAAGATGGGCAACGAGTATACGTGACAGAAGTAGTGGCTGAATCCGTGCGGTTTATGGGCGGCAAAAC
GAATGAATGGATCGAACATGCGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
67.89 |
95.614 |
0.649 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
63.551 |
93.86 |
0.596 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
57.944 |
93.86 |
0.544 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
44.34 |
92.982 |
0.412 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
42.453 |
92.982 |
0.395 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
42.453 |
92.982 |
0.395 |
| ssb | Vibrio cholerae strain A1552 |
38.261 |
100 |
0.386 |
| ssbA | Streptococcus mutans UA159 |
42.718 |
90.351 |
0.386 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
41.509 |
92.982 |
0.386 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
41.509 |
92.982 |
0.386 |
| ssbB/cilA | Streptococcus mitis SK321 |
41.509 |
92.982 |
0.386 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
41.509 |
92.982 |
0.386 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
40 |
92.105 |
0.368 |