Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | FMO13_RS05335 | Genome accession | NZ_CP041382 |
| Coordinates | 1277041..1277469 (-) | Length | 142 a.a. |
| NCBI ID | WP_057677883.1 | Uniprot ID | A0A1V9HE72 |
| Organism | Xanthomonas phaseoli pv. dieffenbachiae strain PL36 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1272041..1282469
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FMO13_RS05315 (FMO13_05510) | pilR | 1273127..1274581 (+) | 1455 | WP_017155148.1 | sigma-54-dependent transcriptional regulator | Regulator |
| FMO13_RS05320 (FMO13_05515) | - | 1274785..1274946 (-) | 162 | Protein_1048 | serine/threonine protein kinase | - |
| FMO13_RS05325 (FMO13_05520) | - | 1274993..1275112 (-) | 120 | WP_057687106.1 | hypothetical protein | - |
| FMO13_RS05330 (FMO13_05525) | pilB | 1275174..1276883 (-) | 1710 | WP_057677884.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| FMO13_RS05335 (FMO13_05530) | pilA | 1277041..1277469 (-) | 429 | WP_057677883.1 | pilin | Machinery gene |
| FMO13_RS05340 (FMO13_05535) | pilC | 1277810..1279072 (+) | 1263 | WP_057677885.1 | type II secretion system F family protein | Machinery gene |
| FMO13_RS05345 (FMO13_05540) | - | 1279079..1279942 (+) | 864 | WP_003491180.1 | prepilin peptidase | - |
| FMO13_RS05350 (FMO13_05545) | coaE | 1279956..1280564 (+) | 609 | WP_022558665.1 | dephospho-CoA kinase | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 14369.47 Da Isoelectric Point: 9.1206
>NTDB_id=371764 FMO13_RS05335 WP_057677883.1 1277041..1277469(-) (pilA) [Xanthomonas phaseoli pv. dieffenbachiae strain PL36]
MKKQNGFTLIELMIVVAIIAILAAIALPAYQDYTVRGRVSEAMVAASAAKTVVAENAANGSALNSGWTPPTATNNVASVA
VAAATGNITVTTTDKAGGGTIIFAPTANGAALTSGTVPTDRISWDCKGGTLVAKYRPAECRT
MKKQNGFTLIELMIVVAIIAILAAIALPAYQDYTVRGRVSEAMVAASAAKTVVAENAANGSALNSGWTPPTATNNVASVA
VAAATGNITVTTTDKAGGGTIIFAPTANGAALTSGTVPTDRISWDCKGGTLVAKYRPAECRT
Nucleotide
Download Length: 429 bp
>NTDB_id=371764 FMO13_RS05335 WP_057677883.1 1277041..1277469(-) (pilA) [Xanthomonas phaseoli pv. dieffenbachiae strain PL36]
ATGAAGAAGCAAAACGGCTTTACCCTTATCGAACTGATGATCGTTGTCGCGATCATCGCAATCCTTGCTGCCATCGCGTT
GCCGGCCTACCAGGACTACACCGTTCGCGGCCGCGTCTCTGAAGCGATGGTTGCCGCGTCTGCCGCCAAGACGGTGGTGG
CCGAAAATGCCGCCAACGGCTCTGCCCTGAATAGCGGGTGGACCCCTCCTACGGCGACCAATAATGTTGCCAGCGTAGCC
GTTGCTGCCGCTACGGGCAATATTACTGTGACCACTACCGATAAGGCCGGCGGCGGCACGATCATTTTTGCTCCCACCGC
TAACGGCGCTGCGCTGACTTCCGGCACCGTTCCTACCGATCGCATTTCGTGGGATTGCAAGGGTGGCACCTTGGTTGCCA
AGTATCGTCCGGCTGAATGCCGCACCTAA
ATGAAGAAGCAAAACGGCTTTACCCTTATCGAACTGATGATCGTTGTCGCGATCATCGCAATCCTTGCTGCCATCGCGTT
GCCGGCCTACCAGGACTACACCGTTCGCGGCCGCGTCTCTGAAGCGATGGTTGCCGCGTCTGCCGCCAAGACGGTGGTGG
CCGAAAATGCCGCCAACGGCTCTGCCCTGAATAGCGGGTGGACCCCTCCTACGGCGACCAATAATGTTGCCAGCGTAGCC
GTTGCTGCCGCTACGGGCAATATTACTGTGACCACTACCGATAAGGCCGGCGGCGGCACGATCATTTTTGCTCCCACCGC
TAACGGCGCTGCGCTGACTTCCGGCACCGTTCCTACCGATCGCATTTCGTGGGATTGCAAGGGTGGCACCTTGGTTGCCA
AGTATCGTCCGGCTGAATGCCGCACCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Ralstonia pseudosolanacearum GMI1000 |
51.572 |
100 |
0.577 |
| pilA2 | Legionella pneumophila str. Paris |
54.795 |
100 |
0.563 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
54.795 |
100 |
0.563 |
| comP | Acinetobacter baylyi ADP1 |
48.428 |
100 |
0.542 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
39.894 |
100 |
0.528 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
40.789 |
100 |
0.437 |
| pilE | Neisseria gonorrhoeae MS11 |
35.625 |
100 |
0.401 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
39.286 |
98.592 |
0.387 |
| pilA | Acinetobacter baumannii strain A118 |
39.007 |
99.296 |
0.387 |