Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | FEO92_RS17825 | Genome accession | NZ_CP040435 |
| Coordinates | 3822192..3822650 (-) | Length | 152 a.a. |
| NCBI ID | WP_099589892.1 | Uniprot ID | - |
| Organism | Stenotrophomonas maltophilia strain PEG-42 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3817192..3827650
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FEO92_RS17810 (FEO92_18005) | pilR | 3818414..3819787 (+) | 1374 | WP_049447478.1 | sigma-54 dependent transcriptional regulator | Regulator |
| FEO92_RS17815 (FEO92_18010) | pilB | 3819893..3821620 (-) | 1728 | WP_099589890.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| FEO92_RS17820 (FEO92_18015) | - | 3821698..3822117 (-) | 420 | WP_099589891.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| FEO92_RS17825 (FEO92_18020) | pilA2 | 3822192..3822650 (-) | 459 | WP_099589892.1 | pilin | Machinery gene |
| FEO92_RS17830 (FEO92_18025) | pilC | 3823011..3824270 (+) | 1260 | WP_099589893.1 | type II secretion system F family protein | Machinery gene |
| FEO92_RS17835 (FEO92_18030) | - | 3824279..3825142 (+) | 864 | WP_032128827.1 | A24 family peptidase | - |
| FEO92_RS17840 (FEO92_18035) | coaE | 3825154..3825765 (+) | 612 | WP_099589894.1 | dephospho-CoA kinase | - |
| FEO92_RS17845 (FEO92_18040) | - | 3825921..3826307 (-) | 387 | WP_154349555.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 152 a.a. Molecular weight: 15477.74 Da Isoelectric Point: 7.8156
>NTDB_id=364423 FEO92_RS17825 WP_099589892.1 3822192..3822650(-) (pilA2) [Stenotrophomonas maltophilia strain PEG-42]
MKNQKGFTLIELMIVVAIIAILAAIALPAYQDYTIRAKVSEGIVQADAAKLAVAETAQSQGILATKVTNEEAAGYVSKAT
TNVKSVGIANGVITVTTQATGAKADPVLVLTPTQTDLDSPITWACTYTSGEAKHVPASCRTKGAAPSGGSGS
MKNQKGFTLIELMIVVAIIAILAAIALPAYQDYTIRAKVSEGIVQADAAKLAVAETAQSQGILATKVTNEEAAGYVSKAT
TNVKSVGIANGVITVTTQATGAKADPVLVLTPTQTDLDSPITWACTYTSGEAKHVPASCRTKGAAPSGGSGS
Nucleotide
Download Length: 459 bp
>NTDB_id=364423 FEO92_RS17825 WP_099589892.1 3822192..3822650(-) (pilA2) [Stenotrophomonas maltophilia strain PEG-42]
ATGAAGAACCAGAAGGGCTTCACCCTGATCGAACTGATGATCGTTGTTGCGATCATCGCCATCCTGGCCGCCATCGCGTT
GCCGGCTTACCAGGACTACACCATCCGCGCCAAGGTGTCGGAAGGTATTGTCCAGGCTGATGCTGCCAAGCTGGCAGTTG
CTGAGACCGCTCAGTCGCAGGGTATCCTGGCGACCAAGGTAACCAACGAAGAAGCTGCAGGTTATGTCAGCAAGGCGACC
ACCAACGTGAAGTCGGTTGGCATCGCAAATGGCGTGATCACCGTCACCACTCAGGCCACGGGCGCGAAGGCTGATCCGGT
TCTGGTCCTGACCCCGACCCAGACTGACCTGGACTCGCCGATTACTTGGGCTTGCACCTACACTTCGGGTGAAGCTAAGC
ACGTTCCCGCCAGCTGCCGCACCAAGGGCGCTGCACCGTCGGGCGGTAGCGGTAGCTAA
ATGAAGAACCAGAAGGGCTTCACCCTGATCGAACTGATGATCGTTGTTGCGATCATCGCCATCCTGGCCGCCATCGCGTT
GCCGGCTTACCAGGACTACACCATCCGCGCCAAGGTGTCGGAAGGTATTGTCCAGGCTGATGCTGCCAAGCTGGCAGTTG
CTGAGACCGCTCAGTCGCAGGGTATCCTGGCGACCAAGGTAACCAACGAAGAAGCTGCAGGTTATGTCAGCAAGGCGACC
ACCAACGTGAAGTCGGTTGGCATCGCAAATGGCGTGATCACCGTCACCACTCAGGCCACGGGCGCGAAGGCTGATCCGGT
TCTGGTCCTGACCCCGACCCAGACTGACCTGGACTCGCCGATTACTTGGGCTTGCACCTACACTTCGGGTGAAGCTAAGC
ACGTTCCCGCCAGCTGCCGCACCAAGGGCGCTGCACCGTCGGGCGGTAGCGGTAGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
58.865 |
92.763 |
0.546 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
58.156 |
92.763 |
0.539 |
| comP | Acinetobacter baylyi ADP1 |
46 |
98.684 |
0.454 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
40.854 |
100 |
0.441 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
40.244 |
100 |
0.434 |
| pilE | Neisseria gonorrhoeae MS11 |
41.25 |
100 |
0.434 |
| pilA/pilA1 | Eikenella corrodens VA1 |
38.608 |
100 |
0.401 |
| pilA | Haemophilus influenzae 86-028NP |
40.714 |
92.105 |
0.375 |
| pilA | Haemophilus influenzae Rd KW20 |
40 |
92.105 |
0.368 |