Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | EYR26_RS17290 | Genome accession | NZ_CP036253 |
| Coordinates | 3664548..3664973 (-) | Length | 141 a.a. |
| NCBI ID | WP_053502729.1 | Uniprot ID | A0AAJ6GYA7 |
| Organism | Xanthomonas oryzae strain NCPPB4346 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3659548..3669973
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EYR26_RS17275 (EYR26_17275) | - | 3660681..3662207 (-) | 1527 | WP_053502734.1 | hypothetical protein | - |
| EYR26_RS17280 (EYR26_17280) | - | 3662177..3662752 (-) | 576 | WP_243735467.1 | hypothetical protein | - |
| EYR26_RS17285 (EYR26_17285) | - | 3662823..3664412 (-) | 1590 | WP_053502731.1 | phosphoethanolamine transferase | - |
| EYR26_RS17290 (EYR26_17290) | pilA2 | 3664548..3664973 (-) | 426 | WP_053502729.1 | pilin | Machinery gene |
| EYR26_RS17295 (EYR26_17295) | pilC | 3665329..3666588 (+) | 1260 | WP_053502795.1 | type II secretion system F family protein | Machinery gene |
| EYR26_RS17300 (EYR26_17300) | - | 3666595..3667458 (+) | 864 | WP_053502727.1 | A24 family peptidase | - |
| EYR26_RS17305 (EYR26_17305) | coaE | 3667472..3668077 (+) | 606 | WP_053502725.1 | dephospho-CoA kinase | - |
| EYR26_RS17310 (EYR26_17310) | - | 3668297..3669631 (-) | 1335 | WP_053502793.1 | HAMP domain-containing sensor histidine kinase | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 14431.65 Da Isoelectric Point: 9.0090
>NTDB_id=347675 EYR26_RS17290 WP_053502729.1 3664548..3664973(-) (pilA2) [Xanthomonas oryzae strain NCPPB4346]
MKKQQGFTLIELMIVVAIIAILAAIALPAYQDYTTRAKLSEALTMSAPAKLAVTETSSSLGGVANVTLANSGYAFPGQTK
YVSGITIASGTGKVTVTSTVPNATGDIVLTPTDVGGGQLKWTCSSAIATKYLPAECRNSGT
MKKQQGFTLIELMIVVAIIAILAAIALPAYQDYTTRAKLSEALTMSAPAKLAVTETSSSLGGVANVTLANSGYAFPGQTK
YVSGITIASGTGKVTVTSTVPNATGDIVLTPTDVGGGQLKWTCSSAIATKYLPAECRNSGT
Nucleotide
Download Length: 426 bp
>NTDB_id=347675 EYR26_RS17290 WP_053502729.1 3664548..3664973(-) (pilA2) [Xanthomonas oryzae strain NCPPB4346]
ATGAAGAAGCAGCAAGGCTTTACACTTATCGAACTGATGATCGTGGTCGCGATCATCGCCATCCTGGCTGCCATCGCGCT
GCCGGCTTATCAGGACTACACCACTCGTGCCAAGCTCAGTGAAGCGCTGACGATGTCGGCACCTGCCAAGCTTGCGGTAA
CGGAGACTTCATCGTCGCTCGGCGGTGTTGCTAATGTTACTCTCGCGAATTCGGGCTACGCATTCCCGGGTCAGACGAAG
TATGTCAGCGGCATCACCATCGCCAGTGGCACGGGTAAAGTCACTGTGACCTCCACGGTGCCCAACGCTACCGGTGACAT
CGTGCTGACCCCGACTGACGTCGGTGGTGGCCAGTTGAAGTGGACCTGCTCTTCCGCCATCGCCACCAAGTACCTGCCGG
CGGAGTGCCGTAACTCGGGCACCTGA
ATGAAGAAGCAGCAAGGCTTTACACTTATCGAACTGATGATCGTGGTCGCGATCATCGCCATCCTGGCTGCCATCGCGCT
GCCGGCTTATCAGGACTACACCACTCGTGCCAAGCTCAGTGAAGCGCTGACGATGTCGGCACCTGCCAAGCTTGCGGTAA
CGGAGACTTCATCGTCGCTCGGCGGTGTTGCTAATGTTACTCTCGCGAATTCGGGCTACGCATTCCCGGGTCAGACGAAG
TATGTCAGCGGCATCACCATCGCCAGTGGCACGGGTAAAGTCACTGTGACCTCCACGGTGCCCAACGCTACCGGTGACAT
CGTGCTGACCCCGACTGACGTCGGTGGTGGCCAGTTGAAGTGGACCTGCTCTTCCGCCATCGCCACCAAGTACCTGCCGG
CGGAGTGCCGTAACTCGGGCACCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
50.735 |
96.454 |
0.489 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
50 |
96.454 |
0.482 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
40.854 |
100 |
0.475 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
39.241 |
100 |
0.44 |
| comP | Acinetobacter baylyi ADP1 |
42.177 |
100 |
0.44 |
| pilE | Neisseria gonorrhoeae MS11 |
37.037 |
100 |
0.426 |
| pilA | Pseudomonas aeruginosa PAK |
37.748 |
100 |
0.404 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
40.58 |
97.872 |
0.397 |
| pilA/pilA1 | Eikenella corrodens VA1 |
37.333 |
100 |
0.397 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
40.741 |
95.745 |
0.39 |
| pilA | Acinetobacter baumannii strain A118 |
36.17 |
100 |
0.362 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
40.157 |
90.071 |
0.362 |