Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilAI | Type | Machinery gene |
| Locus tag | EGY09_RS15745 | Genome accession | NZ_CP033829 |
| Coordinates | 3302788..3303195 (-) | Length | 135 a.a. |
| NCBI ID | WP_114619185.1 | Uniprot ID | - |
| Organism | Stenotrophomonas maltophilia strain FDAARGOS_507 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3297788..3308195
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGY09_RS15735 (EGY09_15710) | pilR | 3299333..3300706 (+) | 1374 | WP_005410795.1 | sigma-54 dependent transcriptional regulator | Regulator |
| EGY09_RS15740 (EGY09_15715) | pilB | 3300832..3302565 (-) | 1734 | WP_123958964.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| EGY09_RS15745 (EGY09_15720) | pilA/pilAI | 3302788..3303195 (-) | 408 | WP_114619185.1 | pilin | Machinery gene |
| EGY09_RS15750 (EGY09_15725) | - | 3303350..3303790 (-) | 441 | WP_005410798.1 | pilin | - |
| EGY09_RS15755 (EGY09_15730) | pilC | 3304143..3305402 (+) | 1260 | WP_099605875.1 | type II secretion system F family protein | Machinery gene |
| EGY09_RS15760 (EGY09_15735) | - | 3305410..3306273 (+) | 864 | WP_123958966.1 | A24 family peptidase | - |
| EGY09_RS15765 (EGY09_15740) | coaE | 3306285..3306896 (+) | 612 | WP_123958968.1 | dephospho-CoA kinase | - |
| EGY09_RS15770 (EGY09_15745) | - | 3307156..3307542 (-) | 387 | WP_005410802.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 135 a.a. Molecular weight: 14314.54 Da Isoelectric Point: 6.6934
>NTDB_id=326198 EGY09_RS15745 WP_114619185.1 3302788..3303195(-) (pilA/pilAI) [Stenotrophomonas maltophilia strain FDAARGOS_507]
MQIQKGFTLIELMIVVAIIAILAAIATVAFQPYIVRTQLTAALADLTPGKTKVEILVNEGRSASLVTPNYIGVAQNAHCS
NVEAELSDSGVGHISCTLKGHSALDGKDLILRRSAEGIWSCDGSAFEARYRPTGC
MQIQKGFTLIELMIVVAIIAILAAIATVAFQPYIVRTQLTAALADLTPGKTKVEILVNEGRSASLVTPNYIGVAQNAHCS
NVEAELSDSGVGHISCTLKGHSALDGKDLILRRSAEGIWSCDGSAFEARYRPTGC
Nucleotide
Download Length: 408 bp
>NTDB_id=326198 EGY09_RS15745 WP_114619185.1 3302788..3303195(-) (pilA/pilAI) [Stenotrophomonas maltophilia strain FDAARGOS_507]
ATGCAGATTCAAAAGGGCTTTACGCTCATCGAACTGATGATCGTGGTGGCTATCATCGCCATCCTGGCGGCGATCGCGAC
GGTGGCGTTCCAGCCATACATCGTCCGCACTCAGTTGACCGCCGCGCTGGCCGATCTCACACCAGGCAAGACCAAGGTGG
AAATCCTCGTCAATGAGGGCCGTTCGGCCAGCCTGGTCACGCCGAACTACATCGGTGTCGCCCAGAACGCCCACTGCTCG
AACGTCGAAGCCGAACTCAGCGACTCCGGTGTCGGCCACATCAGCTGCACCCTCAAGGGACACAGCGCGCTGGACGGCAA
GGACCTGATCCTGCGCCGCTCCGCCGAGGGCATCTGGAGCTGCGATGGCAGCGCGTTCGAAGCGCGCTATCGCCCGACCG
GCTGCTGA
ATGCAGATTCAAAAGGGCTTTACGCTCATCGAACTGATGATCGTGGTGGCTATCATCGCCATCCTGGCGGCGATCGCGAC
GGTGGCGTTCCAGCCATACATCGTCCGCACTCAGTTGACCGCCGCGCTGGCCGATCTCACACCAGGCAAGACCAAGGTGG
AAATCCTCGTCAATGAGGGCCGTTCGGCCAGCCTGGTCACGCCGAACTACATCGGTGTCGCCCAGAACGCCCACTGCTCG
AACGTCGAAGCCGAACTCAGCGACTCCGGTGTCGGCCACATCAGCTGCACCCTCAAGGGACACAGCGCGCTGGACGGCAA
GGACCTGATCCTGCGCCGCTCCGCCGAGGGCATCTGGAGCTGCGATGGCAGCGCGTTCGAAGCGCGCTATCGCCCGACCG
GCTGCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
50.725 |
100 |
0.519 |
| pilA | Pseudomonas aeruginosa PAK |
38.926 |
100 |
0.43 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
41.912 |
100 |
0.422 |
| pilA | Acinetobacter baumannii strain A118 |
40.876 |
100 |
0.415 |
| comP | Acinetobacter baylyi ADP1 |
35.616 |
100 |
0.385 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
36.232 |
100 |
0.37 |
| pilA | Vibrio cholerae C6706 |
33.562 |
100 |
0.363 |
| pilA | Vibrio cholerae strain A1552 |
33.562 |
100 |
0.363 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
33.562 |
100 |
0.363 |