Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | D7D53_RS06835 | Genome accession | NZ_CP032621 |
| Coordinates | 1383141..1383536 (-) | Length | 131 a.a. |
| NCBI ID | WP_120770527.1 | Uniprot ID | - |
| Organism | Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345) | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1378141..1388536
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D7D53_RS06810 (D7D53_06810) | recX | 1378690..1379466 (+) | 777 | WP_120770524.1 | recombination regulator RecX | - |
| D7D53_RS06815 (D7D53_06815) | - | 1379555..1380088 (+) | 534 | WP_120770525.1 | DUF402 domain-containing protein | - |
| D7D53_RS06820 (D7D53_06820) | - | 1380159..1380926 (-) | 768 | WP_000567567.1 | epoxyqueuosine reductase QueH | - |
| D7D53_RS06825 (D7D53_06825) | groL | 1381063..1382685 (-) | 1623 | WP_120770526.1 | chaperonin GroEL | - |
| D7D53_RS06830 (D7D53_06830) | groES | 1382701..1382985 (-) | 285 | WP_000917328.1 | co-chaperone GroES | - |
| D7D53_RS06835 (D7D53_06835) | ssbB/cilA | 1383141..1383536 (-) | 396 | WP_120770527.1 | single-stranded DNA-binding protein | Machinery gene |
| D7D53_RS06840 (D7D53_06840) | - | 1383614..1384375 (-) | 762 | WP_120770528.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| D7D53_RS06845 (D7D53_06845) | ytpR | 1384417..1385043 (-) | 627 | WP_120770529.1 | YtpR family tRNA-binding protein | - |
| D7D53_RS06850 (D7D53_06850) | - | 1385059..1385376 (-) | 318 | WP_120770530.1 | thioredoxin family protein | - |
| D7D53_RS06855 (D7D53_06855) | - | 1385373..1385672 (-) | 300 | WP_120770531.1 | DUF4651 domain-containing protein | - |
| D7D53_RS06860 (D7D53_06860) | - | 1385846..1387453 (-) | 1608 | WP_120770532.1 | CTP synthase | - |
| D7D53_RS06865 (D7D53_06865) | rpoE | 1387690..1388277 (-) | 588 | WP_033687659.1 | DNA-directed RNA polymerase subunit delta | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14838.79 Da Isoelectric Point: 5.9409
>NTDB_id=317198 D7D53_RS06835 WP_120770527.1 1383141..1383536(-) (ssbB/cilA) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
MYNKVILIGRLTSTPELHKTSNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGKLAESLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVILIGRLTSTPELHKTSNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGKLAESLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=317198 D7D53_RS06835 WP_120770527.1 1383141..1383536(-) (ssbB/cilA) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
ATGTATAATAAAGTTATCTTGATTGGACGTTTAACGTCTACACCAGAATTGCACAAAACCAGCAATGACAAGTCAGTGGC
GCGAGCAACTATCGCTGTGAACCGTCGTTATAAAGATCAAAACGGTGAACGTGAAGCTGACTTTGTCAATATGGTTCTAT
GGGGCAAACTAGCAGAAAGCTTGGCCAGCTACGCAACTAAAGGTAGTCTTATCTCTGTGGATGGAGAACTTCGTACCCGT
CGTTTTGAGAAAAATGGTCAGATGAACTATGTGACTGAAGTTCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGACAAGATTTGGCGGATTTGGTTTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCTTGATTGGACGTTTAACGTCTACACCAGAATTGCACAAAACCAGCAATGACAAGTCAGTGGC
GCGAGCAACTATCGCTGTGAACCGTCGTTATAAAGATCAAAACGGTGAACGTGAAGCTGACTTTGTCAATATGGTTCTAT
GGGGCAAACTAGCAGAAAGCTTGGCCAGCTACGCAACTAAAGGTAGTCTTATCTCTGTGGATGGAGAACTTCGTACCCGT
CGTTTTGAGAAAAATGGTCAGATGAACTATGTGACTGAAGTTCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGACAAGATTTGGCGGATTTGGTTTTGGAAGAGGAAGAATTGCCATTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
97.71 |
100 |
0.977 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
96.947 |
100 |
0.969 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
96.947 |
100 |
0.969 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
96.947 |
100 |
0.969 |
| ssbB/cilA | Streptococcus mitis SK321 |
96.947 |
100 |
0.969 |
| ssbA | Streptococcus mutans UA159 |
74.046 |
100 |
0.74 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
72.519 |
100 |
0.725 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
60.714 |
85.496 |
0.519 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
49.558 |
86.26 |
0.427 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
46.296 |
82.443 |
0.382 |