Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | DV115_RS03845 | Genome accession | NZ_CP031325 |
| Coordinates | 741521..741964 (-) | Length | 147 a.a. |
| NCBI ID | WP_003753065.1 | Uniprot ID | - |
| Organism | Neisseria polysaccharea strain M18661 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 736521..746964
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DV115_RS03815 | - | 736581..737453 (+) | 873 | WP_003754144.1 | mechanosensitive ion channel family protein | - |
| DV115_RS03820 | - | 737541..739577 (+) | 2037 | WP_025456913.1 | M3 family metallopeptidase | - |
| DV115_RS03830 | - | 740204..740770 (-) | 567 | WP_003753060.1 | manganese efflux pump MntP family protein | - |
| DV115_RS03845 | pilE | 741521..741964 (-) | 444 | WP_003753065.1 | pilin | Machinery gene |
| DV115_RS12030 | - | 742663..742785 (-) | 123 | WP_301005505.1 | hypothetical protein | - |
| DV115_RS03860 | katA | 742869..744383 (-) | 1515 | WP_025456774.1 | catalase KatA | - |
| DV115_RS03865 | rpoN | 744724..746067 (+) | 1344 | WP_003752038.1 | RNA polymerase factor sigma-54 | - |
| DV115_RS03870 | hpf | 746142..746435 (+) | 294 | WP_003752042.1 | ribosome hibernation-promoting factor, HPF/YfiA family | - |
Sequence
Protein
Download Length: 147 a.a. Molecular weight: 15419.66 Da Isoelectric Point: 9.0147
>NTDB_id=305638 DV115_RS03845 WP_003753065.1 741521..741964(-) (pilE) [Neisseria polysaccharea strain M18661]
MKAIQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQMSEALTLAEGQKAAVVEYFSDNGVFPANNTSAGIATASTIK
GKYVNKVEVGTNTSGATITSTMNTSGVNKDISGKTLVLEGKQNSGSFEWTCKAGTVDNKFLPSSCRK
MKAIQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQMSEALTLAEGQKAAVVEYFSDNGVFPANNTSAGIATASTIK
GKYVNKVEVGTNTSGATITSTMNTSGVNKDISGKTLVLEGKQNSGSFEWTCKAGTVDNKFLPSSCRK
Nucleotide
Download Length: 444 bp
>NTDB_id=305638 DV115_RS03845 WP_003753065.1 741521..741964(-) (pilE) [Neisseria polysaccharea strain M18661]
ATGAAAGCAATCCAAAAAGGTTTCACCCTGATCGAGCTGATGATCGTCATCGCCATCGTCGGTATCTTGGCAGCCGTCGC
CCTGCCCGCATACCAAGACTACACCGCGCGCGCCCAAATGTCCGAAGCCCTGACTTTGGCTGAAGGTCAAAAAGCCGCAG
TGGTCGAGTATTTTTCCGACAACGGAGTATTCCCTGCCAACAATACCTCCGCAGGTATTGCTACTGCTTCCACTATTAAA
GGTAAGTATGTGAATAAGGTAGAAGTTGGTACAAACACATCCGGTGCCACAATTACCTCCACCATGAACACTTCGGGTGT
GAACAAAGACATTTCAGGAAAAACCTTGGTTTTGGAAGGTAAACAAAACAGCGGTTCGTTCGAGTGGACTTGTAAAGCAG
GTACTGTGGACAACAAATTCCTGCCGTCTTCCTGCCGCAAATAA
ATGAAAGCAATCCAAAAAGGTTTCACCCTGATCGAGCTGATGATCGTCATCGCCATCGTCGGTATCTTGGCAGCCGTCGC
CCTGCCCGCATACCAAGACTACACCGCGCGCGCCCAAATGTCCGAAGCCCTGACTTTGGCTGAAGGTCAAAAAGCCGCAG
TGGTCGAGTATTTTTCCGACAACGGAGTATTCCCTGCCAACAATACCTCCGCAGGTATTGCTACTGCTTCCACTATTAAA
GGTAAGTATGTGAATAAGGTAGAAGTTGGTACAAACACATCCGGTGCCACAATTACCTCCACCATGAACACTTCGGGTGT
GAACAAAGACATTTCAGGAAAAACCTTGGTTTTGGAAGGTAAACAAAACAGCGGTTCGTTCGAGTGGACTTGTAAAGCAG
GTACTGTGGACAACAAATTCCTGCCGTCTTCCTGCCGCAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae MS11 |
57.669 |
100 |
0.639 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
57.407 |
100 |
0.633 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
36.649 |
100 |
0.476 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
39.412 |
100 |
0.456 |
| pilA2 | Legionella pneumophila str. Paris |
44.056 |
97.279 |
0.429 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
44.056 |
97.279 |
0.429 |
| comP | Acinetobacter baylyi ADP1 |
42 |
100 |
0.429 |
| pilA/pilA1 | Eikenella corrodens VA1 |
39.13 |
100 |
0.429 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
40.541 |
100 |
0.408 |
| pilA | Acinetobacter baumannii strain A118 |
39.456 |
100 |
0.395 |
| pilA | Pseudomonas aeruginosa PAK |
37.179 |
100 |
0.395 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
36.913 |
100 |
0.374 |