Detailed information NTG0030045

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: SPH_RS10800
• Genome accession: NC_010380
• Coordinates: 2024717..2025151 (-)
• Length: 144 a.a.
• NCBI ID: WP_041864711.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae Hungary19A-6
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2019717..2030151

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPH_RS10760 (SPH_2195)	rnpA	2020131..2020502 (-)	372	WP_000739244.1	ribonuclease P protein component	-
SPH_RS14265 (SPH_2196)	-	2020519..2020650 (-)	132	WP_000768904.1	hypothetical protein	-
SPH_RS10765 (SPH_2197)	-	2020651..2021841 (-)	1191	WP_000167753.1	acetate kinase	-
SPH_RS10770 (SPH_2198)	comYH	2021892..2022845 (-)	954	WP_000345126.1	class I SAM-dependent methyltransferase	Machinery gene
SPH_RS12980	-	2022906..2023500 (-)	595	Protein_2032	methyltransferase domain-containing protein	-
SPH_RS10785 (SPH_2201)	comGG/cglG	2023637..2024050 (-)	414	WP_000265625.1	competence type IV pilus minor pilin ComGG	Machinery gene
SPH_RS10790 (SPH_2202)	comGF/cglF	2024028..2024489 (-)	462	WP_000250508.1	competence type IV pilus minor pilin ComGF	Machinery gene
SPH_RS10795 (SPH_2203)	comGE/cglE	2024452..2024754 (-)	303	WP_191995726.1	competence type IV pilus minor pilin ComGE	Machinery gene
SPH_RS10800 (SPH_2204)	comGD/cglD	2024717..2025151 (-)	435	WP_041864711.1	competence type IV pilus minor pilin ComGD	Machinery gene
SPH_RS10805 (SPH_2205)	comGC/cglC	2025114..2025437 (-)	324	WP_000738648.1	comG operon protein ComGC	Machinery gene
SPH_RS10810 (SPH_2206)	comGB/cglB	2025439..2026455 (-)	1017	WP_079218398.1	competence type IV pilus assembly protein ComGB	Machinery gene
SPH_RS10815 (SPH_2207)	comGA/cglA/cilD	2026403..2027344 (-)	942	WP_000249559.1	competence type IV pilus ATPase ComGA	Machinery gene
SPH_RS10820 (SPH_2208)	-	2027420..2027785 (-)	366	WP_000286415.1	DUF1033 family protein	-
SPH_RS10825 (SPH_2209)	-	2028052..2029307 (+)	1256	WP_088804233.1	ISL3 family transposase	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15849.31 Da
• Isoelectric Point: 10.6700

>NTDB_id=30045 SPH_RS10800 WP_041864711.1 2024717..2025151(-) (comGD/cglD) [Streptococcus pneumoniae Hungary19A-6]
MLNKIRLKRSQIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLSIDGQT
ISNGSQKLTVPKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=30045 SPH_RS10800 WP_041864711.1 2024717..2025151(-) (comGD/cglD) [Streptococcus pneumoniae Hungary19A-6]
ATGCTAAACAAAATAAGACTCAAACGGTCGCAGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGT
GAGTATCCTTGCCTTGGGCTTGTCAGGCTCTGTCCAGTCCACTTTTGCGGCGGTAGAGGAGCAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGAAACCCAAAAACGCAGTGTAGCCAGTCAGCAAAAGACAAGTTTGAGCATAGACGGACAGACC
ATTAGCAATGGCAGTCAAAAGCTGACAGTTCCTAAAGGAATTCAAGCACCATCGGGACAAAGTATCACATTTGACCGAGC
TGGGGGCAATTCGTCTCTGGCTAAGGTTGAATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACAAAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	94.444	100	0.944
comGD/cglD	Streptococcus pneumoniae Rx1	96.992	92.361	0.896
comGD/cglD	Streptococcus pneumoniae D39	96.992	92.361	0.896
comGD/cglD	Streptococcus pneumoniae R6	96.992	92.361	0.896
comGD/cglD	Streptococcus pneumoniae TIGR4	96.241	92.361	0.889
comGD/cglD	Streptococcus mitis SK321	96.241	92.361	0.889
comYD	Streptococcus gordonii str. Challis substr. CH1	58.209	93.056	0.542
comYD	Streptococcus mutans UA140	49.231	90.278	0.444
comYD	Streptococcus mutans UA159	49.231	90.278	0.444