Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   C5Y82_RS05425 Genome accession   NZ_CP027034
Coordinates   1110656..1110853 (+) Length   65 a.a.
NCBI ID   WP_003211983.1    Uniprot ID   -
Organism   Bacillus pumilus strain 150a     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1105656..1115853
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C5Y82_RS05395 (C5Y82_05395) - 1106064..1106243 (+) 180 WP_003211282.1 YjzC family protein -
  C5Y82_RS05400 (C5Y82_05400) - 1106414..1107679 (+) 1266 WP_119124683.1 MFS transporter -
  C5Y82_RS05405 (C5Y82_05405) - 1107795..1107989 (-) 195 WP_003211779.1 YjzD family protein -
  C5Y82_RS05410 (C5Y82_05410) - 1108201..1108941 (+) 741 WP_119124684.1 hypothetical protein -
  C5Y82_RS05415 (C5Y82_05415) - 1109017..1109592 (+) 576 WP_119124685.1 nad binding enzyme -
  C5Y82_RS05420 (C5Y82_05420) med 1109683..1110645 (+) 963 WP_119124686.1 BMP family ABC transporter substrate-binding protein Regulator
  C5Y82_RS05425 (C5Y82_05425) comZ 1110656..1110853 (+) 198 WP_003211983.1 ComZ family protein Regulator
  C5Y82_RS05430 (C5Y82_05430) - 1110864..1111097 (-) 234 WP_012009551.1 hypothetical protein -
  C5Y82_RS05435 (C5Y82_05435) - 1111267..1112205 (+) 939 WP_012009552.1 beta-ketoacyl-ACP synthase III -
  C5Y82_RS05440 (C5Y82_05440) fabF 1112227..1113468 (+) 1242 WP_012009553.1 beta-ketoacyl-ACP synthase II -
  C5Y82_RS05445 (C5Y82_05445) - 1113546..1114349 (+) 804 WP_119124687.1 DUF2268 domain-containing protein -
  C5Y82_RS05450 (C5Y82_05450) - 1114511..1115491 (+) 981 WP_119124688.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7391.42 Da        Isoelectric Point: 4.1652

>NTDB_id=274634 C5Y82_RS05425 WP_003211983.1 1110656..1110853(+) (comZ) [Bacillus pumilus strain 150a]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLEPEALQPLLSLFTSVMQEAYELGKADAESEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=274634 C5Y82_RS05425 WP_003211983.1 1110656..1110853(+) (comZ) [Bacillus pumilus strain 150a]
ATGCAGCACGAAAAATCGATGGAATTTTTACAAATTGCCATGAAGTATTTTCCGCAAGCAAAAGAAGAATTAGATAAAGC
AGGTATTCAGCTTGAGCCTGAAGCTCTTCAGCCGCTTTTATCATTGTTTACATCTGTTATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677

Multiple sequence alignment