Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   C5Y82_RS05545 Genome accession   NZ_CP027034
Coordinates   1133919..1134584 (+) Length   221 a.a.
NCBI ID   WP_012009573.1    Uniprot ID   -
Organism   Bacillus pumilus strain 150a     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1128919..1139584
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C5Y82_RS05515 (C5Y82_05515) - 1129270..1130331 (+) 1062 WP_041816211.1 ABC transporter ATP-binding protein -
  C5Y82_RS05520 (C5Y82_05520) - 1130324..1131253 (+) 930 WP_119124693.1 ATP-binding cassette domain-containing protein -
  C5Y82_RS05525 (C5Y82_05525) - 1131359..1131646 (+) 288 WP_088003072.1 hypothetical protein -
  C5Y82_RS05530 (C5Y82_05530) - 1131783..1132361 (+) 579 WP_012009571.1 GNAT family N-acetyltransferase -
  C5Y82_RS05535 (C5Y82_05535) spxA 1132555..1132950 (+) 396 WP_003211421.1 transcriptional regulator SpxA -
  C5Y82_RS05540 (C5Y82_05540) - 1132991..1133656 (-) 666 WP_119124694.1 TerC family protein -
  C5Y82_RS05545 (C5Y82_05545) mecA 1133919..1134584 (+) 666 WP_012009573.1 adaptor protein MecA Regulator
  C5Y82_RS05550 (C5Y82_05550) cls 1134670..1136190 (+) 1521 WP_088003078.1 cardiolipin synthase -
  C5Y82_RS05555 (C5Y82_05555) - 1136353..1137513 (+) 1161 WP_119124695.1 competence protein CoiA family protein -
  C5Y82_RS05560 (C5Y82_05560) pepF 1137728..1139554 (+) 1827 WP_285855895.1 oligoendopeptidase F -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 26405.18 Da        Isoelectric Point: 3.9851

>NTDB_id=274637 C5Y82_RS05545 WP_012009573.1 1133919..1134584(+) (mecA) [Bacillus pumilus strain 150a]
MEIERINEHTVKFYISYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIVVTKAQL
SKDGQKLELPIPEDKKDQTDEESLDALLDDFQKEEQDQEDHNEKDKKLQLQFVLKMDDFEDLIALSQLNMQDFTTSLYSF
ENRYYLYVDFHEDLSDEQVENKLSILLEYAHESVVSIYRLKEYGQLIIEGNALETIQQHFS

Nucleotide


Download         Length: 666 bp        

>NTDB_id=274637 C5Y82_RS05545 WP_012009573.1 1133919..1134584(+) (mecA) [Bacillus pumilus strain 150a]
ATGGAAATCGAAAGAATTAATGAACATACAGTAAAATTTTATATTTCCTACGGTGATATTGAAGACCGCGGATTTGACCG
TGAAGAGATTTGGTATAATCGCGAACGCAGTGAAGAGCTGTTTTGGGAAGTAATGGACGAAGTGCACGAAGAAGAAGAAT
TTGCAGTTGAGGGACCACTTTGGATTCAAGTGCAGGCACTTGACAAAGGTCTTGAAATTGTCGTGACGAAAGCCCAACTT
TCTAAAGATGGACAAAAGCTCGAATTGCCGATTCCAGAAGATAAAAAAGATCAAACAGATGAAGAAAGTCTAGACGCCCT
TCTTGATGATTTTCAAAAAGAAGAGCAGGATCAAGAAGACCATAATGAGAAGGACAAAAAACTTCAACTTCAATTTGTGT
TGAAAATGGATGACTTTGAAGATTTGATTGCACTTTCTCAATTAAATATGCAGGATTTTACCACAAGTTTATATTCGTTT
GAAAACCGTTATTATCTATATGTTGACTTCCACGAGGATTTGTCAGATGAGCAAGTGGAGAATAAGCTCAGCATTTTGCT
TGAATATGCTCATGAATCAGTGGTCAGCATTTACAGACTGAAAGAATACGGTCAGCTGATTATCGAAGGAAATGCCCTTG
AAACGATTCAACAGCACTTCTCGTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

77.376

100

0.774

Multiple sequence alignment