Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | CA928_RS09345 | Genome accession | NZ_CP021264 |
| Coordinates | 2084573..2084986 (-) | Length | 137 a.a. |
| NCBI ID | WP_027227779.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. fraseri strain D-5387 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2079573..2089986
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA928_RS09335 | letS | 2080503..2083235 (+) | 2733 | WP_027227781.1 | two-component system sensor histidine kinase LetS | Regulator |
| CA928_RS09340 | - | 2083332..2084576 (+) | 1245 | WP_027227780.1 | 6-phosphofructokinase | - |
| CA928_RS09345 | pilA2 | 2084573..2084986 (-) | 414 | WP_027227779.1 | pilin | Machinery gene |
| CA928_RS09350 | pilA2 | 2085183..2085593 (-) | 411 | WP_027227778.1 | pilin | Machinery gene |
| CA928_RS09355 | - | 2085897..2086214 (+) | 318 | WP_010947633.1 | BolA/IbaG family iron-sulfur metabolism protein | - |
| CA928_RS09360 | - | 2086289..2087710 (+) | 1422 | WP_027227777.1 | APC family permease | - |
| CA928_RS09365 | - | 2087840..2089270 (-) | 1431 | WP_027227776.1 | cellulase family glycosylhydrolase | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14448.79 Da Isoelectric Point: 6.2016
>NTDB_id=229306 CA928_RS09345 WP_027227779.1 2084573..2084986(-) (pilA2) [Legionella pneumophila subsp. fraseri strain D-5387]
MRTKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMTSAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTLDATGRILTWDCTGGTLISKYRPAYCRP
MRTKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMTSAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTLDATGRILTWDCTGGTLISKYRPAYCRP
Nucleotide
Download Length: 414 bp
>NTDB_id=229306 CA928_RS09345 WP_027227779.1 2084573..2084986(-) (pilA2) [Legionella pneumophila subsp. fraseri strain D-5387]
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATCCTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCAAGAGTGGTCGAAGGCTTGGAAATGACTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAATACTTTGCCAGCAAATCAGGCAGATACGGGTTATACCAGTCCTGCCCCAACAATTAATGTA
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACAGCAAACGCAGGTAATGGTACTATTACAATGGT
TCCTACATTAGACGCTACAGGCAGAATACTCACTTGGGATTGCACTGGTGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATCCTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCAAGAGTGGTCGAAGGCTTGGAAATGACTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAATACTTTGCCAGCAAATCAGGCAGATACGGGTTATACCAGTCCTGCCCCAACAATTAATGTA
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACAGCAAACGCAGGTAATGGTACTATTACAATGGT
TCCTACATTAGACGCTACAGGCAGAATACTCACTTGGGATTGCACTGGTGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
72.993 |
100 |
0.73 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
72.263 |
100 |
0.723 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
46.341 |
100 |
0.555 |
| comP | Acinetobacter baylyi ADP1 |
46.897 |
100 |
0.496 |
| pilA/pilA1 | Eikenella corrodens VA1 |
37.5 |
100 |
0.416 |
| pilE | Neisseria gonorrhoeae MS11 |
36.538 |
100 |
0.416 |
| pilA | Haemophilus influenzae Rd KW20 |
39.716 |
100 |
0.409 |
| pilA | Vibrio cholerae C6706 |
36 |
100 |
0.394 |
| pilA | Vibrio cholerae strain A1552 |
36 |
100 |
0.394 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
36 |
100 |
0.394 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
37.41 |
100 |
0.38 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
37.41 |
100 |
0.38 |