Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | CA934_RS09965 | Genome accession | NZ_CP021259 |
| Coordinates | 2175809..2176222 (-) | Length | 137 a.a. |
| NCBI ID | WP_028378743.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain D-7708 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2170809..2181222
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA934_RS09955 | letS | 2171739..2174471 (+) | 2733 | WP_028379420.1 | two-component system sensor histidine kinase LetS | Regulator |
| CA934_RS09960 | - | 2174568..2175812 (+) | 1245 | WP_028378744.1 | 6-phosphofructokinase | - |
| CA934_RS09965 | pilA2 | 2175809..2176222 (-) | 414 | WP_028378743.1 | pilin | Machinery gene |
| CA934_RS09970 | pilA2 | 2176434..2176844 (-) | 411 | WP_014844212.1 | pilin | Machinery gene |
| CA934_RS09975 | - | 2177147..2177464 (+) | 318 | WP_106225445.1 | BolA/IbaG family iron-sulfur metabolism protein | - |
| CA934_RS09980 | - | 2177539..2178960 (+) | 1422 | WP_106225446.1 | APC family permease | - |
| CA934_RS09985 | - | 2179043..2180473 (-) | 1431 | WP_028379416.1 | cellulase family glycosylhydrolase | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14388.74 Da Isoelectric Point: 6.2016
>NTDB_id=229181 CA934_RS09965 WP_028378743.1 2175809..2176222(-) (pilA2) [Legionella pneumophila strain D-7708]
MRTKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMASAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTLDATGRILTWDCTGGTLLGKYRPAYCRP
MRTKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMASAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTLDATGRILTWDCTGGTLLGKYRPAYCRP
Nucleotide
Download Length: 414 bp
>NTDB_id=229181 CA934_RS09965 WP_028378743.1 2175809..2176222(-) (pilA2) [Legionella pneumophila strain D-7708]
ATGAGAACGAAAGGGTTTACTTTAATCGAGCTGATGATCGTTGCCGCTATCCTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCACGGGTGGTCGAAGGATTGGAAATGGCTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAACACTTTGCCAGCAAATCAGGCAGATACAGGTTATACCAGCCCTGCCCCAACAATTAATGTC
GCTTCTATTGCCATTGGTAATCAAGGCATTATTACCATTACCTACACAGCAAATGCAGGTAATGGTACTATTACAATGGT
TCCTACATTAGACGCTACGGGCAGAATACTCACTTGGGACTGCACTGGCGGCACCCTGCTTGGTAAATATCGTCCAGCCT
ACTGTCGCCCTTAA
ATGAGAACGAAAGGGTTTACTTTAATCGAGCTGATGATCGTTGCCGCTATCCTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCACGGGTGGTCGAAGGATTGGAAATGGCTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAACACTTTGCCAGCAAATCAGGCAGATACAGGTTATACCAGCCCTGCCCCAACAATTAATGTC
GCTTCTATTGCCATTGGTAATCAAGGCATTATTACCATTACCTACACAGCAAATGCAGGTAATGGTACTATTACAATGGT
TCCTACATTAGACGCTACGGGCAGAATACTCACTTGGGACTGCACTGGCGGCACCCTGCTTGGTAAATATCGTCCAGCCT
ACTGTCGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
74.453 |
100 |
0.745 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
73.723 |
100 |
0.737 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
45.732 |
100 |
0.547 |
| comP | Acinetobacter baylyi ADP1 |
47.586 |
100 |
0.504 |
| pilA/pilA1 | Eikenella corrodens VA1 |
36.842 |
100 |
0.409 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
37.41 |
100 |
0.38 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
36.691 |
100 |
0.372 |
| pilA | Vibrio cholerae C6706 |
36.496 |
100 |
0.365 |
| pilA | Vibrio cholerae strain A1552 |
36.496 |
100 |
0.365 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
36.496 |
100 |
0.365 |