Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | SPS_RS03310 | Genome accession | NC_004606 |
| Coordinates | 633367..633786 (+) | Length | 139 a.a. |
| NCBI ID | WP_011054759.1 | Uniprot ID | A0A5S4TJJ6 |
| Organism | Streptococcus pyogenes SSI-1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 628367..638786
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPS_RS03255 (SPs0601) | - | 628424..628615 (+) | 192 | WP_002986891.1 | hypothetical protein | - |
| SPS_RS03260 (SPs0602) | - | 628626..629354 (+) | 729 | WP_011054767.1 | phage antirepressor KilAC domain-containing protein | - |
| SPS_RS10265 | - | 629387..629536 (+) | 150 | WP_002986888.1 | hypothetical protein | - |
| SPS_RS03265 (SPs0604) | - | 629533..629733 (-) | 201 | WP_002986887.1 | KTSC domain-containing protein | - |
| SPS_RS09795 | - | 629809..629976 (+) | 168 | WP_002986885.1 | hypothetical protein | - |
| SPS_RS03275 (SPs0606) | - | 630222..630479 (+) | 258 | WP_002988339.1 | hypothetical protein | - |
| SPS_RS03280 (SPs0607) | - | 630508..630693 (+) | 186 | WP_011054765.1 | hypothetical protein | - |
| SPS_RS09800 | - | 630787..631044 (+) | 258 | WP_011106684.1 | hypothetical protein | - |
| SPS_RS03285 (SPs0609) | - | 631166..631579 (+) | 414 | WP_011054763.1 | DnaD domain protein | - |
| SPS_RS03290 (SPs0610) | - | 631560..631793 (+) | 234 | WP_011054762.1 | hypothetical protein | - |
| SPS_RS10270 | - | 631790..631930 (+) | 141 | WP_011284979.1 | hypothetical protein | - |
| SPS_RS03295 (SPs0611) | - | 631941..632195 (+) | 255 | WP_011054761.1 | hypothetical protein | - |
| SPS_RS03300 (SPs0612) | - | 632217..632699 (+) | 483 | WP_011018142.1 | siphovirus Gp157 family protein | - |
| SPS_RS03305 (SPs0613) | - | 632700..633374 (+) | 675 | WP_011054760.1 | ERF family protein | - |
| SPS_RS03310 (SPs0614) | ssbA | 633367..633786 (+) | 420 | WP_011054759.1 | single-stranded DNA-binding protein | Machinery gene |
| SPS_RS03315 (SPs0615) | - | 633792..633995 (+) | 204 | WP_011106686.1 | hypothetical protein | - |
| SPS_RS03320 | - | 633995..634435 (+) | 441 | WP_011054758.1 | RusA family crossover junction endodeoxyribonuclease | - |
| SPS_RS03325 (SPs0617) | - | 634432..634788 (+) | 357 | WP_011054757.1 | hypothetical protein | - |
| SPS_RS03330 (SPs0618) | - | 634785..635036 (+) | 252 | WP_011054756.1 | hypothetical protein | - |
| SPS_RS03335 (SPs0619) | - | 635030..635314 (+) | 285 | WP_011054755.1 | DUF3310 domain-containing protein | - |
| SPS_RS03340 | - | 635311..635580 (+) | 270 | WP_011054754.1 | hypothetical protein | - |
| SPS_RS03345 (SPs0621) | - | 635590..635994 (+) | 405 | WP_011054753.1 | YopX family protein | - |
| SPS_RS10275 | - | 635991..636161 (+) | 171 | WP_011054752.1 | hypothetical protein | - |
| SPS_RS03350 (SPs0623) | - | 636158..636664 (+) | 507 | WP_011054751.1 | DUF1642 domain-containing protein | - |
| SPS_RS10280 | - | 636661..636831 (+) | 171 | WP_164997036.1 | hypothetical protein | - |
| SPS_RS03355 (SPs0624) | - | 637105..637545 (+) | 441 | WP_011017866.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
| SPS_RS09820 | - | 638184..638441 (-) | 258 | WP_011054748.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 139 a.a. Molecular weight: 15649.29 Da Isoelectric Point: 4.8660
>NTDB_id=22800 SPS_RS03310 WP_011054759.1 633367..633786(+) (ssbA) [Streptococcus pyogenes SSI-1]
MINNVVLVGRMTKDAELRYTASQVAVATFTLAVNRRFKEQNGEREADFINCVIWRQSAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRNQQSGQGNSSQNDNSQPFGNSNPMDISDDDLPF
MINNVVLVGRMTKDAELRYTASQVAVATFTLAVNRRFKEQNGEREADFINCVIWRQSAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRNQQSGQGNSSQNDNSQPFGNSNPMDISDDDLPF
Nucleotide
Download Length: 420 bp
>NTDB_id=22800 SPS_RS03310 WP_011054759.1 633367..633786(+) (ssbA) [Streptococcus pyogenes SSI-1]
ATGATTAATAATGTAGTACTAGTTGGTCGCATGACCAAGGACGCAGAGCTTCGCTATACAGCGAGTCAAGTAGCTGTAGC
TACGTTCACACTTGCGGTAAACCGCAGATTTAAAGAGCAAAACGGGGAGAGAGAAGCAGATTTCATTAACTGTGTTATCT
GGCGACAGTCTGCTGAAAATTTAGCCAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTAA
TCAACAATCTGGTCAAGGTAACTCTTCGCAAAACGATAACAGTCAACCGTTTGGCAATTCAAACCCAATGGATATTTCAG
ACGATGATCTGCCGTTTTAA
ATGATTAATAATGTAGTACTAGTTGGTCGCATGACCAAGGACGCAGAGCTTCGCTATACAGCGAGTCAAGTAGCTGTAGC
TACGTTCACACTTGCGGTAAACCGCAGATTTAAAGAGCAAAACGGGGAGAGAGAAGCAGATTTCATTAACTGTGTTATCT
GGCGACAGTCTGCTGAAAATTTAGCCAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTAA
TCAACAATCTGGTCAAGGTAACTCTTCGCAAAACGATAACAGTCAACCGTTTGGCAATTCAAACCCAATGGATATTTCAG
ACGATGATCTGCCGTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
54.857 |
100 |
0.691 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
55.882 |
100 |
0.683 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
46.043 |
100 |
0.46 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
45.324 |
100 |
0.453 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
45.324 |
100 |
0.453 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
45.324 |
100 |
0.453 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
45.324 |
100 |
0.453 |
| ssbB/cilA | Streptococcus mitis SK321 |
45.324 |
100 |
0.453 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
44.604 |
100 |
0.446 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
54.955 |
79.856 |
0.439 |
| ssbA | Streptococcus mutans UA159 |
41.727 |
100 |
0.417 |
| ssb | Vibrio cholerae strain A1552 |
31.214 |
100 |
0.388 |
| ssb | Glaesserella parasuis strain SC1401 |
28.814 |
100 |
0.367 |