Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | A6J88_RS15230 | Genome accession | NZ_CP020452 |
| Coordinates | 259310..259762 (-) | Length | 150 a.a. |
| NCBI ID | WP_080613397.1 | Uniprot ID | - |
| Organism | Neisseria mucosa strain FDAARGOS_260 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 254310..264762
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J88_RS15210 (A6J88_01215) | tyrS | 255408..256703 (+) | 1296 | WP_080613394.1 | tyrosine--tRNA ligase | - |
| A6J88_RS15215 (A6J88_01220) | - | 256771..258192 (-) | 1422 | WP_080613395.1 | sulfatase-like hydrolase/transferase | - |
| A6J88_RS15225 (A6J88_01225) | - | 258731..259213 (-) | 483 | WP_080613396.1 | pilin | - |
| A6J88_RS15230 (A6J88_01230) | pilE | 259310..259762 (-) | 453 | WP_080613397.1 | pilin | Machinery gene |
| A6J88_RS15240 (A6J88_01240) | recG | 260565..262607 (-) | 2043 | WP_099048403.1 | ATP-dependent DNA helicase RecG | Machinery gene |
| A6J88_RS15245 (A6J88_01245) | asd | 262957..264072 (-) | 1116 | WP_070539629.1 | aspartate-semialdehyde dehydrogenase | - |
Sequence
Protein
Download Length: 150 a.a. Molecular weight: 15634.03 Da Isoelectric Point: 8.9650
>NTDB_id=223286 A6J88_RS15230 WP_080613397.1 259310..259762(-) (pilE) [Neisseria mucosa strain FDAARGOS_260]
MKAIQKGFTLIELMIVIAIIGILAVIALPAYQDYTGRAQVSEAISLAEGQKSAIIEYYADKGAWPTDNAAAGVAAASKIT
GKYVDNIAVKDGAITATMKSSGVNADVAGKTVTLSPEQSTDKKKALSEGSFTWKCTAGTVPTKFLPSSCR
MKAIQKGFTLIELMIVIAIIGILAVIALPAYQDYTGRAQVSEAISLAEGQKSAIIEYYADKGAWPTDNAAAGVAAASKIT
GKYVDNIAVKDGAITATMKSSGVNADVAGKTVTLSPEQSTDKKKALSEGSFTWKCTAGTVPTKFLPSSCR
Nucleotide
Download Length: 453 bp
>NTDB_id=223286 A6J88_RS15230 WP_080613397.1 259310..259762(-) (pilE) [Neisseria mucosa strain FDAARGOS_260]
ATGAAAGCAATCCAAAAAGGTTTCACCCTGATCGAATTGATGATCGTAATCGCAATTATCGGTATTCTGGCAGTTATCGC
TCTGCCTGCTTACCAAGACTACACCGGTCGTGCGCAAGTTTCTGAAGCGATTTCTTTGGCGGAAGGACAAAAATCGGCAA
TTATTGAATACTATGCTGATAAAGGTGCATGGCCTACTGATAATGCTGCCGCAGGTGTTGCTGCAGCCTCTAAGATTACT
GGTAAATATGTAGATAACATAGCAGTAAAAGACGGCGCAATTACTGCGACCATGAAATCTAGCGGTGTGAACGCTGATGT
CGCAGGTAAAACAGTAACTCTGTCTCCTGAACAAAGCACAGATAAGAAAAAAGCTTTGTCTGAAGGTTCCTTCACTTGGA
AATGTACTGCTGGTACCGTTCCGACTAAATTCTTGCCATCTTCTTGCCGTTAA
ATGAAAGCAATCCAAAAAGGTTTCACCCTGATCGAATTGATGATCGTAATCGCAATTATCGGTATTCTGGCAGTTATCGC
TCTGCCTGCTTACCAAGACTACACCGGTCGTGCGCAAGTTTCTGAAGCGATTTCTTTGGCGGAAGGACAAAAATCGGCAA
TTATTGAATACTATGCTGATAAAGGTGCATGGCCTACTGATAATGCTGCCGCAGGTGTTGCTGCAGCCTCTAAGATTACT
GGTAAATATGTAGATAACATAGCAGTAAAAGACGGCGCAATTACTGCGACCATGAAATCTAGCGGTGTGAACGCTGATGT
CGCAGGTAAAACAGTAACTCTGTCTCCTGAACAAAGCACAGATAAGAAAAAAGCTTTGTCTGAAGGTTCCTTCACTTGGA
AATGTACTGCTGGTACCGTTCCGACTAAATTCTTGCCATCTTCTTGCCGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae MS11 |
52.096 |
100 |
0.58 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
51.807 |
100 |
0.573 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
38.624 |
100 |
0.487 |
| pilA/pilA1 | Eikenella corrodens VA1 |
43.293 |
100 |
0.473 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
42.581 |
100 |
0.44 |
| pilA | Acinetobacter baumannii strain A118 |
43.137 |
100 |
0.44 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
44.218 |
98 |
0.433 |
| pilA2 | Legionella pneumophila str. Paris |
44.218 |
98 |
0.433 |
| comP | Acinetobacter baylyi ADP1 |
39.744 |
100 |
0.413 |
| pilA | Acinetobacter nosocomialis M2 |
38.462 |
100 |
0.4 |
| pilA | Pseudomonas aeruginosa PAK |
36.25 |
100 |
0.387 |