Detailed information    

insolico Bioinformatically predicted

Overview


Name   recG   Type   Machinery gene
Locus tag   A6J88_RS15240 Genome accession   NZ_CP020452
Coordinates   260565..262607 (-) Length   680 a.a.
NCBI ID   WP_099048403.1    Uniprot ID   -
Organism   Neisseria mucosa strain FDAARGOS_260     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 255565..267607
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J88_RS15215 (A6J88_01220) - 256771..258192 (-) 1422 WP_080613395.1 sulfatase-like hydrolase/transferase -
  A6J88_RS15225 (A6J88_01225) - 258731..259213 (-) 483 WP_080613396.1 pilin -
  A6J88_RS15230 (A6J88_01230) pilE 259310..259762 (-) 453 WP_080613397.1 pilin Machinery gene
  A6J88_RS15240 (A6J88_01240) recG 260565..262607 (-) 2043 WP_099048403.1 ATP-dependent DNA helicase RecG Machinery gene
  A6J88_RS15245 (A6J88_01245) asd 262957..264072 (-) 1116 WP_070539629.1 aspartate-semialdehyde dehydrogenase -

Sequence


Protein


Download         Length: 680 a.a.        Molecular weight: 75185.01 Da        Isoelectric Point: 6.8939

>NTDB_id=223287 A6J88_RS15240 WP_099048403.1 260565..262607(-) (recG) [Neisseria mucosa strain FDAARGOS_260]
MMTPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQI
ADDSGSVLFLRFIHFYASHQKQMAAGKRIRAVGEIKHGFYGDEMIHPKIRDAESSGLAESLTPVYPTVNGLNQPTLRRII
QTALDVTPLHDTLPDALLGRLKLPHLAESLRLLHSPPPSFTIHQLSDGALPAWQRLKFDELLAQQLSMRLARQKRVSGTA
AALGGDGTLTQALRHALPFALTDAQERVVSEIRRDMAQTHPMHRLLQGDVGSGKTIVAALSALTAIESGAQAAVMAPTEI
LAEQHFIKFKQWLEPLGLEVVWLSGSQRKKAKDEAKAKLADGTVKIAVGTHALFSDDVEFQNLGLVIVDEQHRFGVAQRL
ALKNKGRDVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRLVNNVRRAEVEGFVLNICRKGQQAYWVCPLI
EESETLQLQTATETLEQLQAALPELNIGLVHGRMKAAEKAEVMAEFAAGRLNVLVATTVIEVGVDVPNAALMVIEHAERM
GLAQLHQLRGRVGRGAAESVCVLLFAEPLSELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFANLEE
DLHLLEQAREIAPMLIEQNPEIVEAHLARWLASREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=223287 A6J88_RS15240 WP_099048403.1 260565..262607(-) (recG) [Neisseria mucosa strain FDAARGOS_260]
ATGATGACGCCCGAAACTCAGAAACAGCTCAAAATTACCGACGTTTCCGCCAAGAAGCTCGACAAACTCAACCTCCATAC
CGCGTGGGATTTGGTTTTGCATCTGCCGCTGCGTTACGAGGACGAGACGCACATCATGCCGATTAAGGATGCACCGATCG
GTGTGCCGTGTCAGGTCGAGGGTGAAGTTATCCATCAGGAAGTAACGTTCAAACCGCGCAAGCAGCTGATTGTCCAAATC
GCCGACGATTCCGGCAGCGTCCTTTTTCTGCGCTTCATCCACTTTTACGCCAGCCATCAGAAGCAGATGGCGGCCGGCAA
ACGTATCCGCGCCGTGGGCGAAATCAAACACGGGTTTTACGGCGACGAGATGATTCACCCTAAAATCCGCGATGCCGAGA
GCAGTGGTTTGGCAGAAAGCCTTACGCCTGTCTATCCGACCGTAAACGGTTTGAACCAGCCCACTTTGCGCCGCATCATT
CAGACGGCGTTGGACGTTACGCCGCTGCACGATACGCTGCCCGATGCTTTATTGGGTCGTCTGAAACTGCCGCACCTCGC
CGAAAGCCTGCGCCTTTTGCATTCGCCTCCGCCGAGTTTTACCATCCATCAGCTTTCCGACGGCGCGCTGCCCGCATGGC
AGCGGCTCAAATTCGACGAACTTTTGGCGCAACAGCTTTCCATGCGTTTGGCGCGGCAGAAGCGCGTCAGCGGCACGGCG
GCGGCATTGGGCGGCGACGGTACGCTGACCCAAGCCCTGCGCCACGCCTTGCCGTTTGCCCTGACCGATGCCCAAGAAAG
GGTCGTGTCCGAAATCCGCCGCGACATGGCGCAAACCCACCCCATGCACCGCCTGCTGCAAGGCGATGTCGGTAGCGGCA
AAACCATCGTCGCCGCCTTGTCCGCCCTGACCGCCATCGAATCCGGCGCGCAGGCGGCCGTGATGGCGCCGACCGAAATC
CTTGCCGAACAGCATTTCATCAAGTTCAAACAATGGCTCGAACCGTTGGGTCTCGAAGTCGTCTGGCTCTCCGGCAGCCA
GCGCAAAAAAGCCAAAGACGAAGCCAAAGCCAAACTCGCCGACGGCACCGTCAAAATCGCCGTCGGCACGCACGCCCTGT
TTTCAGACGACGTCGAGTTCCAAAATCTCGGCTTGGTGATTGTGGACGAACAACACCGCTTCGGCGTTGCCCAACGCCTC
GCCCTCAAAAACAAAGGGCGCGACGTCCACCAACTGATGATGTCCGCCACGCCCATCCCGCGCACGCTCGCCATGAGTTT
TTTCGCCGACTTGGACGTGTCCGTCATTGACGAACTCCCACCCGGGCGCACCCCGATTAAAACCCGCCTCGTTAACAACG
TCCGCCGCGCCGAAGTCGAAGGCTTCGTCCTCAACATCTGCCGCAAAGGGCAGCAGGCGTACTGGGTCTGTCCGCTGATT
GAAGAAAGCGAAACCCTGCAACTGCAAACCGCCACCGAAACCCTCGAGCAGCTTCAGGCGGCATTGCCCGAACTCAACAT
CGGCTTGGTACACGGGCGCATGAAAGCCGCCGAAAAAGCCGAAGTCATGGCGGAATTTGCCGCAGGCCGTCTGAACGTCT
TGGTTGCCACCACTGTCATCGAAGTTGGCGTAGATGTGCCCAACGCCGCCCTGATGGTAATCGAACACGCCGAGCGCATG
GGCTTGGCGCAGCTGCACCAATTACGCGGGCGGGTAGGGCGCGGCGCGGCAGAAAGCGTGTGCGTCCTTCTGTTTGCCGA
ACCCTTGAGCGAACTTGCCAAAGCGCGGCTGAAAGTCATCTACGAACACACCGACGGCTTCGAAATCGCCCGCCAAGACC
TCAACATCCGCGGCCCCGGCGAATTTCTCGGCGCGCGCCAAAGCGGCGTCCCCATGCTGCGCTTCGCCAACCTCGAAGAA
GACCTGCACCTCTTGGAACAGGCGCGCGAAATCGCCCCGATGCTGATTGAACAAAACCCCGAAATCGTCGAAGCGCATCT
GGCGAGGTGGCTTGCCAGCAGGGAAGGATATTTGGGCGTGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

93.824

100

0.938


Multiple sequence alignment