Detailed information NTG0216350

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: BWR56_RS08860
• Genome accession: NZ_CP019562
• Coordinates: 1788693..1789127 (-)
• Length: 144 a.a.
• NCBI ID: WP_049505563.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain S.MIT/ORALIS-351
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1783693..1794127

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BWR56_RS08825 (BWR56_1747)	rnpA	1784216..1784587 (-)	372	WP_000748120.1	ribonuclease P protein component	-
BWR56_RS08830 (BWR56_1748)	-	1784737..1785927 (-)	1191	WP_049505568.1	acetate kinase	-
BWR56_RS08835 (BWR56_1749)	comYH	1785978..1786931 (-)	954	WP_049505567.1	class I SAM-dependent methyltransferase	Machinery gene
BWR56_RS08840 (BWR56_1750)	-	1786990..1787580 (-)	591	WP_049505566.1	class I SAM-dependent methyltransferase	-
BWR56_RS08845 (BWR56_1751)	comGG/cglG	1787613..1788026 (-)	414	WP_049505565.1	competence type IV pilus minor pilin ComGG	Machinery gene
BWR56_RS08850 (BWR56_1752)	comGF/cglF	1788004..1788465 (-)	462	WP_049505564.1	competence type IV pilus minor pilin ComGF	Machinery gene
BWR56_RS08855 (BWR56_1753)	comGE/cglE	1788428..1788730 (-)	303	WP_192832458.1	competence type IV pilus minor pilin ComGE	Machinery gene
BWR56_RS08860 (BWR56_1754)	comGD/cglD	1788693..1789127 (-)	435	WP_049505563.1	competence type IV pilus minor pilin ComGD	Machinery gene
BWR56_RS08865 (BWR56_1755)	comGC/cglC	1789090..1789413 (-)	324	WP_000735800.1	competence type IV pilus major pilin ComGC	Machinery gene
BWR56_RS08870 (BWR56_1756)	comGB/cglB	1789415..1790431 (-)	1017	WP_076984831.1	competence type IV pilus assembly protein ComGB	Machinery gene
BWR56_RS08875 (BWR56_1757)	comGA/cglA/cilD	1790379..1791320 (-)	942	WP_049505562.1	competence type IV pilus ATPase ComGA	Machinery gene
BWR56_RS08880 (BWR56_1758)	-	1791390..1791755 (-)	366	WP_000286399.1	DUF1033 family protein	-
BWR56_RS08885 (BWR56_1759)	nagA	1791909..1793060 (-)	1152	WP_076984832.1	N-acetylglucosamine-6-phosphate deacetylase	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15872.34 Da
• Isoelectric Point: 10.5150

>NTDB_id=216350 BWR56_RS08860 WP_049505563.1 1788693..1789127(-) (comGD/cglD) [Streptococcus oralis strain S.MIT/ORALIS-351]
MQNKKQVKLLQIKAFTMLESLLVLGLVSILALGLSGSVQSSFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQT
ISNGNQKLTVPKGIQAPSGQSIIFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=216350 BWR56_RS08860 WP_049505563.1 1788693..1789127(-) (comGD/cglD) [Streptococcus oralis strain S.MIT/ORALIS-351]
ATGCAAAACAAAAAACAAGTCAAACTGTTGCAGATTAAGGCTTTTACTATGCTTGAAAGTCTCTTAGTTTTGGGACTTGT
GAGTATCCTTGCTTTGGGCTTGTCCGGTTCTGTTCAATCCAGTTTTGCGGCGGTAGAGGAGCAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGAAACGCAAAAACGCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGACAGACG
ATCAGCAATGGCAATCAAAAGTTGACAGTTCCTAAAGGAATTCAGGCACCATCGGGACAAAGCATTATATTTGACCGAGC
TGGGGGCAATTCGTCCCTGGCTAAGGTTGAATTTCAGACCAGCAAAGGAGCGATTCGTTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACAAAAAATTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	93.75	100	0.938
comGD/cglD	Streptococcus pneumoniae Rx1	96.241	92.361	0.889
comGD/cglD	Streptococcus pneumoniae D39	96.241	92.361	0.889
comGD/cglD	Streptococcus pneumoniae R6	96.241	92.361	0.889
comGD/cglD	Streptococcus pneumoniae TIGR4	95.489	92.361	0.882
comGD/cglD	Streptococcus mitis SK321	95.489	92.361	0.882
comYD	Streptococcus gordonii str. Challis substr. CH1	58.14	89.583	0.521
comYD	Streptococcus mutans UA140	48.837	89.583	0.437
comYD	Streptococcus mutans UA159	48.837	89.583	0.437