Detailed information NTG0216346

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: CWQ22_RS10390
• Genome accession: NZ_CP025027
• Coordinates: 1974520..1975629 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264870.1
• Uniprot ID: Q3JYE9
• Organism: Streptococcus agalactiae strain SGEHI2015-107
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1969520..1980629

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CWQ22_RS10365 (CWQ22_10365)	-	1969892..1970731 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
CWQ22_RS10370 (CWQ22_10370)	pgsA	1970731..1971273 (-)	543	WP_000239224.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
CWQ22_RS10375 (CWQ22_10375)	-	1971396..1972679 (-)	1284	WP_000217765.1	pitrilysin family protein	-
CWQ22_RS10380 (CWQ22_10380)	-	1972681..1973925 (-)	1245	WP_000706190.1	pitrilysin family protein	-
CWQ22_RS10385 (CWQ22_10385)	yaaA	1974164..1974517 (+)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
CWQ22_RS10390 (CWQ22_10390)	recF	1974520..1975629 (+)	1110	WP_000264870.1	DNA replication/repair protein RecF	Machinery gene
CWQ22_RS10395 (CWQ22_10395)	-	1975641..1976507 (-)	867	WP_000398683.1	GRP family sugar transporter	-
CWQ22_RS10400 (CWQ22_10400)	-	1976563..1977225 (-)	663	WP_001871057.1	helix-turn-helix transcriptional regulator	-
CWQ22_RS10405 (CWQ22_10405)	guaB	1977300..1978781 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
CWQ22_RS10410 (CWQ22_10410)	-	1978938..1979423 (-)	486	WP_001034427.1	arginine repressor	-
CWQ22_RS10415 (CWQ22_10415)	-	1979433..1980113 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42471.27 Da
• Isoelectric Point: 7.3132

>NTDB_id=216346 CWQ22_RS10390 WP_000264870.1 1974520..1975629(+) (recF) [Streptococcus agalactiae strain SGEHI2015-107]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=216346 CWQ22_RS10390 WP_000264870.1 1974520..1975629(+) (recF) [Streptococcus agalactiae strain SGEHI2015-107]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q3JYE9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447