Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | BIZ52_RS09310 | Genome accession | NZ_CP017457 |
| Coordinates | 2078467..2078880 (-) | Length | 137 a.a. |
| NCBI ID | WP_027227779.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. fraseri strain Detroit-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2073467..2083880
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BIZ52_RS09300 (BIZ52_09210) | letS | 2074397..2077129 (+) | 2733 | WP_027227781.1 | two-component system sensor histidine kinase LetS | Regulator |
| BIZ52_RS09305 (BIZ52_09215) | - | 2077226..2078470 (+) | 1245 | WP_027227780.1 | 6-phosphofructokinase | - |
| BIZ52_RS09310 (BIZ52_09220) | pilA2 | 2078467..2078880 (-) | 414 | WP_027227779.1 | pilin | Machinery gene |
| BIZ52_RS09315 (BIZ52_09225) | pilA2 | 2079077..2079487 (-) | 411 | WP_027227778.1 | pilin | Machinery gene |
| BIZ52_RS09320 (BIZ52_09230) | - | 2079791..2080108 (+) | 318 | WP_010947633.1 | BolA family transcriptional regulator | - |
| BIZ52_RS09325 (BIZ52_09235) | - | 2080183..2081604 (+) | 1422 | WP_027227777.1 | APC family permease | - |
| BIZ52_RS09330 (BIZ52_09240) | - | 2081734..2083164 (-) | 1431 | WP_027227776.1 | cellulase family glycosylhydrolase | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14448.79 Da Isoelectric Point: 6.2016
>NTDB_id=198375 BIZ52_RS09310 WP_027227779.1 2078467..2078880(-) (pilA2) [Legionella pneumophila subsp. fraseri strain Detroit-1]
MRTKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMTSAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTLDATGRILTWDCTGGTLISKYRPAYCRP
MRTKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMTSAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTLDATGRILTWDCTGGTLISKYRPAYCRP
Nucleotide
Download Length: 414 bp
>NTDB_id=198375 BIZ52_RS09310 WP_027227779.1 2078467..2078880(-) (pilA2) [Legionella pneumophila subsp. fraseri strain Detroit-1]
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATCCTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCAAGAGTGGTCGAAGGCTTGGAAATGACTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAATACTTTGCCAGCAAATCAGGCAGATACGGGTTATACCAGTCCTGCCCCAACAATTAATGTA
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACAGCAAACGCAGGTAATGGTACTATTACAATGGT
TCCTACATTAGACGCTACAGGCAGAATACTCACTTGGGATTGCACTGGTGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATCCTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCAAGAGTGGTCGAAGGCTTGGAAATGACTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAATACTTTGCCAGCAAATCAGGCAGATACGGGTTATACCAGTCCTGCCCCAACAATTAATGTA
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACAGCAAACGCAGGTAATGGTACTATTACAATGGT
TCCTACATTAGACGCTACAGGCAGAATACTCACTTGGGATTGCACTGGTGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
72.993 |
100 |
0.73 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
72.263 |
100 |
0.723 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
46.341 |
100 |
0.555 |
| comP | Acinetobacter baylyi ADP1 |
46.897 |
100 |
0.496 |
| pilA/pilA1 | Eikenella corrodens VA1 |
37.5 |
100 |
0.416 |
| pilE | Neisseria gonorrhoeae MS11 |
36.538 |
100 |
0.416 |
| pilA | Haemophilus influenzae Rd KW20 |
39.716 |
100 |
0.409 |
| pilA | Vibrio cholerae C6706 |
36 |
100 |
0.394 |
| pilA | Vibrio cholerae strain A1552 |
36 |
100 |
0.394 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
36 |
100 |
0.394 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
37.41 |
100 |
0.38 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
37.41 |
100 |
0.38 |