Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | BI364_RS19010 | Genome accession | NZ_CP017415 |
| Coordinates | 2977153..2977431 (+) | Length | 92 a.a. |
| NCBI ID | WP_083251559.1 | Uniprot ID | - |
| Organism | Acidihalobacter yilgarnensis strain F5 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2972153..2982431
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BI364_RS14375 (BI364_14375) | sucC | 2972533..2973702 (-) | 1170 | WP_070079334.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| BI364_RS14380 (BI364_14380) | - | 2973849..2974079 (+) | 231 | WP_070080101.1 | PP0621 family protein | - |
| BI364_RS14385 (BI364_14385) | - | 2974083..2975510 (+) | 1428 | WP_070079335.1 | nitrogen regulation protein NR(II) | - |
| BI364_RS14390 (BI364_14390) | pilR | 2975612..2976967 (+) | 1356 | WP_070079336.1 | sigma-54 dependent transcriptional regulator | Regulator |
| BI364_RS19010 (BI364_14395) | pilA2 | 2977153..2977431 (+) | 279 | WP_083251559.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| BI364_RS17625 | - | 2977365..2977649 (+) | 285 | WP_197495732.1 | pilin | - |
| BI364_RS14400 (BI364_14400) | pilA | 2977870..2978340 (+) | 471 | WP_070079337.1 | pilin | Machinery gene |
| BI364_RS14405 (BI364_14405) | - | 2978411..2980399 (+) | 1989 | WP_070079338.1 | hypothetical protein | - |
| BI364_RS14410 (BI364_14410) | - | 2980392..2981267 (+) | 876 | WP_070079339.1 | glycosyltransferase family 2 protein | - |
| BI364_RS14415 (BI364_14415) | - | 2981264..2982418 (+) | 1155 | WP_070079340.1 | glycosyltransferase family 4 protein | - |
Sequence
Protein
Download Length: 92 a.a. Molecular weight: 9884.74 Da Isoelectric Point: 8.8816
>NTDB_id=198002 BI364_RS19010 WP_083251559.1 2977153..2977431(+) (pilA2) [Acidihalobacter yilgarnensis strain F5]
MKKVQQGFTLIELMIVVAIIGILAAIAIPAYQDYTIRAKVTDGINLAAAAKTAVSATYASNGTFGEPIPLICILALLLPP
RFQVNTLSQYQY
MKKVQQGFTLIELMIVVAIIGILAAIAIPAYQDYTIRAKVTDGINLAAAAKTAVSATYASNGTFGEPIPLICILALLLPP
RFQVNTLSQYQY
Nucleotide
Download Length: 279 bp
>NTDB_id=198002 BI364_RS19010 WP_083251559.1 2977153..2977431(+) (pilA2) [Acidihalobacter yilgarnensis strain F5]
ATGAAGAAGGTTCAACAGGGCTTCACACTGATCGAACTGATGATCGTGGTGGCCATCATCGGCATCCTGGCCGCCATCGC
CATCCCGGCCTACCAGGACTACACCATTCGCGCCAAGGTCACCGACGGCATCAATCTGGCCGCTGCGGCCAAGACTGCGG
TTTCCGCCACGTATGCCTCCAATGGGACATTCGGGGAGCCAATACCACTAATTTGTATTTTGGCCTTGCTCCTGCCGCCT
CGATTTCAAGTAAATACACTCAGTCAGTATCAGTATTAA
ATGAAGAAGGTTCAACAGGGCTTCACACTGATCGAACTGATGATCGTGGTGGCCATCATCGGCATCCTGGCCGCCATCGC
CATCCCGGCCTACCAGGACTACACCATTCGCGCCAAGGTCACCGACGGCATCAATCTGGCCGCTGCGGCCAAGACTGCGG
TTTCCGCCACGTATGCCTCCAATGGGACATTCGGGGAGCCAATACCACTAATTTGTATTTTGGCCTTGCTCCTGCCGCCT
CGATTTCAAGTAAATACACTCAGTCAGTATCAGTATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila strain ERS1305867 |
78.947 |
61.957 |
0.489 |
| pilA2 | Legionella pneumophila str. Paris |
78.947 |
61.957 |
0.489 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
74.576 |
64.13 |
0.478 |
| pilA | Vibrio campbellii strain DS40M4 |
47.727 |
95.652 |
0.457 |
| pilA/pilA1 | Eikenella corrodens VA1 |
64.062 |
69.565 |
0.446 |
| pilE | Neisseria gonorrhoeae MS11 |
59.091 |
71.739 |
0.424 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
60 |
70.652 |
0.424 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
59.375 |
69.565 |
0.413 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
60.656 |
66.304 |
0.402 |
| comP | Acinetobacter baylyi ADP1 |
72.549 |
55.435 |
0.402 |