Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | A4W75_RS05705 | Genome accession | NZ_CP016467 |
| Coordinates | 1095005..1095724 (-) | Length | 239 a.a. |
| NCBI ID | WP_253732251.1 | Uniprot ID | - |
| Organism | Latilactobacillus curvatus strain TMW 1.27 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1090005..1100724
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4W75_RS05670 (A4W75_05485) | - | 1091106..1092116 (-) | 1011 | WP_054644024.1 | class I SAM-dependent methyltransferase | - |
| A4W75_RS05675 (A4W75_05490) | - | 1092241..1092564 (-) | 324 | WP_039099486.1 | hypothetical protein | - |
| A4W75_RS05680 (A4W75_05495) | - | 1092542..1092922 (-) | 381 | WP_004270914.1 | ComGF family competence protein | - |
| A4W75_RS11010 | - | 1092944..1093027 (-) | 84 | Protein_1128 | type II secretion system protein | - |
| A4W75_RS05685 (A4W75_05500) | - | 1092993..1093298 (-) | 306 | WP_056965894.1 | hypothetical protein | - |
| A4W75_RS05690 (A4W75_05505) | - | 1093285..1093644 (-) | 360 | WP_158022155.1 | hypothetical protein | - |
| A4W75_RS05695 (A4W75_05510) | comGC | 1093709..1094017 (-) | 309 | WP_004270901.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| A4W75_RS05700 (A4W75_05515) | comGB | 1094014..1095015 (-) | 1002 | WP_004270906.1 | type II secretion system F family protein | Machinery gene |
| A4W75_RS05705 (A4W75_05520) | comGA | 1095005..1095724 (-) | 720 | WP_253732251.1 | ATPase, T2SS/T4P/T4SS family | Machinery gene |
| A4W75_RS05710 (A4W75_05530) | - | 1095983..1096714 (-) | 732 | WP_004270897.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| A4W75_RS05715 (A4W75_05535) | - | 1096804..1097304 (-) | 501 | WP_004270893.1 | VanZ family protein | - |
| A4W75_RS05720 (A4W75_05540) | - | 1097407..1097784 (+) | 378 | WP_111447553.1 | hypothetical protein | - |
| A4W75_RS05730 (A4W75_05550) | - | 1097965..1098300 (-) | 336 | WP_136903898.1 | hypothetical protein | - |
| A4W75_RS05735 (A4W75_05555) | - | 1098495..1098734 (+) | 240 | WP_004270892.1 | cytochrome b5 domain-containing protein | - |
Sequence
Protein
Download Length: 239 a.a. Molecular weight: 26107.85 Da Isoelectric Point: 5.0493
>NTDB_id=188454 A4W75_RS05705 WP_253732251.1 1095005..1095724(-) (comGA) [Latilactobacillus curvatus strain TMW 1.27]
MAQSNEVSRGMDISETRRPQTGRSAIEVAGELIYLRLATVGDFLNRESLVVRFIYPIGQTYHCDDSQILSRLMQLIQQPG
LLLFAGPTGSGKTTSLYYLAEQVMQDKMVVAIEDPIEIQQPAFLQLQVNEAAGLTYAALLKISLRLRPDTLIIGEIRDLQ
TAQHAVSAALSGHLVLSTIHARSTTGVMDRLLDLGISHSQLTACLAGVAYQSLVVEGHNVAAHYELATAQQLEEAVHED
MAQSNEVSRGMDISETRRPQTGRSAIEVAGELIYLRLATVGDFLNRESLVVRFIYPIGQTYHCDDSQILSRLMQLIQQPG
LLLFAGPTGSGKTTSLYYLAEQVMQDKMVVAIEDPIEIQQPAFLQLQVNEAAGLTYAALLKISLRLRPDTLIIGEIRDLQ
TAQHAVSAALSGHLVLSTIHARSTTGVMDRLLDLGISHSQLTACLAGVAYQSLVVEGHNVAAHYELATAQQLEEAVHED
Nucleotide
Download Length: 720 bp
>NTDB_id=188454 A4W75_RS05705 WP_253732251.1 1095005..1095724(-) (comGA) [Latilactobacillus curvatus strain TMW 1.27]
ATGGCTCAATCAAATGAAGTATCAAGGGGGATGGATATCAGTGAAACTCGGCGTCCACAGACCGGCCGTTCAGCGATCGA
GGTGGCAGGCGAATTGATTTATTTACGGTTGGCAACCGTGGGGGATTTTTTGAATCGGGAAAGTTTAGTTGTTCGTTTCA
TTTATCCCATTGGGCAGACTTATCATTGCGACGACTCGCAGATTTTAAGTCGTTTAATGCAGTTAATTCAGCAACCAGGA
TTATTGCTATTTGCCGGTCCAACTGGTTCAGGGAAGACAACAAGTTTGTACTATCTTGCGGAACAAGTCATGCAAGATAA
GATGGTGGTTGCGATTGAAGATCCGATAGAGATTCAACAGCCAGCTTTCTTACAGTTACAGGTGAATGAAGCCGCAGGGT
TAACCTATGCAGCATTGTTGAAAATCAGTTTGCGATTACGGCCTGATACCTTAATTATTGGTGAGATTCGCGACTTACAG
ACGGCCCAACACGCGGTTTCTGCGGCGTTGAGCGGTCACTTGGTACTAAGTACGATTCACGCGCGAAGTACAACGGGGGT
GATGGACCGTCTATTAGATCTTGGAATTAGCCACTCACAATTAACCGCTTGTTTAGCGGGTGTTGCCTATCAATCACTAG
TGGTCGAAGGCCACAATGTAGCGGCCCACTATGAGTTAGCAACTGCACAACAATTGGAGGAGGCTGTTCATGAAGACTAA
ATGGCTCAATCAAATGAAGTATCAAGGGGGATGGATATCAGTGAAACTCGGCGTCCACAGACCGGCCGTTCAGCGATCGA
GGTGGCAGGCGAATTGATTTATTTACGGTTGGCAACCGTGGGGGATTTTTTGAATCGGGAAAGTTTAGTTGTTCGTTTCA
TTTATCCCATTGGGCAGACTTATCATTGCGACGACTCGCAGATTTTAAGTCGTTTAATGCAGTTAATTCAGCAACCAGGA
TTATTGCTATTTGCCGGTCCAACTGGTTCAGGGAAGACAACAAGTTTGTACTATCTTGCGGAACAAGTCATGCAAGATAA
GATGGTGGTTGCGATTGAAGATCCGATAGAGATTCAACAGCCAGCTTTCTTACAGTTACAGGTGAATGAAGCCGCAGGGT
TAACCTATGCAGCATTGTTGAAAATCAGTTTGCGATTACGGCCTGATACCTTAATTATTGGTGAGATTCGCGACTTACAG
ACGGCCCAACACGCGGTTTCTGCGGCGTTGAGCGGTCACTTGGTACTAAGTACGATTCACGCGCGAAGTACAACGGGGGT
GATGGACCGTCTATTAGATCTTGGAATTAGCCACTCACAATTAACCGCTTGTTTAGCGGGTGTTGCCTATCAATCACTAG
TGGTCGAAGGCCACAATGTAGCGGCCCACTATGAGTTAGCAACTGCACAACAATTGGAGGAGGCTGTTCATGAAGACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Latilactobacillus sakei subsp. sakei 23K |
76.818 |
92.05 |
0.707 |
| comGA/cglA/cilD | Streptococcus mitis NCTC 12261 |
50 |
87.029 |
0.435 |
| comGA/cglA | Streptococcus sobrinus strain NIDR 6715-7 |
48.341 |
88.285 |
0.427 |
| comGA/cglA/cilD | Streptococcus pneumoniae R6 |
49.038 |
87.029 |
0.427 |
| comGA/cglA/cilD | Streptococcus pneumoniae TIGR4 |
49.038 |
87.029 |
0.427 |
| comGA/cglA/cilD | Streptococcus pneumoniae Rx1 |
49.038 |
87.029 |
0.427 |
| comGA/cglA/cilD | Streptococcus pneumoniae D39 |
49.038 |
87.029 |
0.427 |
| comYA | Streptococcus mutans UA159 |
41.772 |
99.163 |
0.414 |
| comYA | Streptococcus mutans UA140 |
41.772 |
99.163 |
0.414 |
| comYA | Streptococcus gordonii str. Challis substr. CH1 |
44.86 |
89.54 |
0.402 |
| comGA | Lactococcus lactis subsp. cremoris KW2 |
45.673 |
87.029 |
0.397 |
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
41.038 |
88.703 |
0.364 |