Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AL510_RS08040 | Genome accession | NZ_CP014027 |
| Coordinates | 1569688..1570113 (+) | Length | 141 a.a. |
| NCBI ID | WP_011285575.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain FDAARGOS_149 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1564688..1575113
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AL510_RS07990 (AL510_07755) | - | 1564863..1565063 (+) | 201 | WP_002992770.1 | helix-turn-helix domain-containing protein | - |
| AL510_RS07995 (AL510_07760) | - | 1565173..1565382 (-) | 210 | WP_011017885.1 | hypothetical protein | - |
| AL510_RS09740 | - | 1565513..1565752 (-) | 240 | WP_227874181.1 | hypothetical protein | - |
| AL510_RS09745 (AL510_09560) | - | 1565986..1566174 (+) | 189 | Protein_1476 | XRE family transcriptional regulator | - |
| AL510_RS08010 (AL510_07770) | - | 1566188..1567018 (+) | 831 | WP_009881060.1 | phage replisome organizer N-terminal domain-containing protein | - |
| AL510_RS08015 (AL510_07775) | - | 1567005..1567787 (+) | 783 | WP_011285581.1 | ATP-binding protein | - |
| AL510_RS08020 (AL510_07780) | - | 1567928..1568281 (+) | 354 | WP_011285579.1 | hypothetical protein | - |
| AL510_RS08025 (AL510_07785) | - | 1568262..1568516 (+) | 255 | WP_011285578.1 | hypothetical protein | - |
| AL510_RS08030 (AL510_07790) | - | 1568538..1569020 (+) | 483 | WP_011285577.1 | siphovirus Gp157 family protein | - |
| AL510_RS08035 (AL510_07795) | - | 1569021..1569695 (+) | 675 | WP_011285576.1 | ERF family protein | - |
| AL510_RS08040 (AL510_07800) | ssb | 1569688..1570113 (+) | 426 | WP_011285575.1 | single-stranded DNA-binding protein | Machinery gene |
| AL510_RS08045 (AL510_07805) | - | 1570119..1570322 (+) | 204 | WP_011106686.1 | hypothetical protein | - |
| AL510_RS08050 (AL510_07810) | - | 1570322..1570762 (+) | 441 | WP_011285574.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AL510_RS08055 (AL510_07815) | - | 1570759..1571115 (+) | 357 | WP_011284873.1 | hypothetical protein | - |
| AL510_RS09835 (AL510_07820) | - | 1571112..1571357 (+) | 246 | WP_011285573.1 | hypothetical protein | - |
| AL510_RS08065 (AL510_07825) | - | 1571357..1571593 (+) | 237 | WP_002995955.1 | DUF3310 domain-containing protein | - |
| AL510_RS09560 | - | 1571590..1571760 (+) | 171 | WP_002995952.1 | hypothetical protein | - |
| AL510_RS08070 (AL510_07830) | - | 1571757..1572041 (+) | 285 | WP_011018134.1 | hypothetical protein | - |
| AL510_RS08075 (AL510_07835) | - | 1572043..1572675 (+) | 633 | WP_011018133.1 | N-6 DNA methylase | - |
| AL510_RS08080 (AL510_07840) | - | 1572678..1573202 (+) | 525 | WP_011285572.1 | DUF1642 domain-containing protein | - |
| AL510_RS08085 (AL510_07845) | - | 1573199..1573465 (+) | 267 | WP_011018131.1 | hypothetical protein | - |
| AL510_RS08090 (AL510_07850) | - | 1573751..1574185 (+) | 435 | WP_011054810.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15995.63 Da Isoelectric Point: 4.5748
>NTDB_id=167535 AL510_RS08040 WP_011285575.1 1569688..1570113(+) (ssb) [Streptococcus pyogenes strain FDAARGOS_149]
MINNIVLVGRMTKDAELRYTASQVAVATFTLAVNRRFKEQNGEREADFINCVIWRQSAENLANWAKKGALIGVTGRIQTR
NYENQQEQRVYVTEVVAESFQMLESRNSQQQSGQDNSSQNDNSQPFGNSNPMDISDDDLPF
MINNIVLVGRMTKDAELRYTASQVAVATFTLAVNRRFKEQNGEREADFINCVIWRQSAENLANWAKKGALIGVTGRIQTR
NYENQQEQRVYVTEVVAESFQMLESRNSQQQSGQDNSSQNDNSQPFGNSNPMDISDDDLPF
Nucleotide
Download Length: 426 bp
>NTDB_id=167535 AL510_RS08040 WP_011285575.1 1569688..1570113(+) (ssb) [Streptococcus pyogenes strain FDAARGOS_149]
ATGATTAACAACATTGTGCTAGTTGGTCGCATGACCAAGGACGCAGAGCTTCGCTATACAGCGAGTCAAGTAGCTGTAGC
TACGTTCACACTTGCGGTAAACCGCAGATTTAAAGAGCAAAACGGGGAGAGAGAAGCAGATTTCATTAACTGTGTTATCT
GGCGACAGTCTGCTGAAAATTTAGCCAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGAACAACGTGTCTATGTGACGGAAGTTGTTGCAGAGAGTTTCCAAATGTTGGAAAGTCGAAA
TAGCCAGCAACAATCTGGTCAAGATAACTCTTCGCAAAACGATAACAGTCAACCGTTTGGCAATTCAAACCCAATGGATA
TTTCAGACGATGATCTGCCGTTTTAA
ATGATTAACAACATTGTGCTAGTTGGTCGCATGACCAAGGACGCAGAGCTTCGCTATACAGCGAGTCAAGTAGCTGTAGC
TACGTTCACACTTGCGGTAAACCGCAGATTTAAAGAGCAAAACGGGGAGAGAGAAGCAGATTTCATTAACTGTGTTATCT
GGCGACAGTCTGCTGAAAATTTAGCCAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGAACAACGTGTCTATGTGACGGAAGTTGTTGCAGAGAGTTTCCAAATGTTGGAAAGTCGAAA
TAGCCAGCAACAATCTGGTCAAGATAACTCTTCGCAAAACGATAACAGTCAACCGTTTGGCAATTCAAACCCAATGGATA
TTTCAGACGATGATCTGCCGTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
55.294 |
100 |
0.667 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
54.07 |
100 |
0.66 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
43.972 |
100 |
0.44 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
43.262 |
100 |
0.433 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
43.262 |
100 |
0.433 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
43.262 |
100 |
0.433 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
43.262 |
100 |
0.433 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
43.262 |
100 |
0.433 |
| ssbB/cilA | Streptococcus mitis SK321 |
43.262 |
100 |
0.433 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
51.786 |
79.433 |
0.411 |
| ssbA | Streptococcus mutans UA159 |
40.426 |
100 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
29.379 |
100 |
0.369 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
49.524 |
74.468 |
0.369 |