Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | AOC36_RS10960 | Genome accession | NZ_CP013213 |
| Coordinates | 2355108..2355548 (-) | Length | 146 a.a. |
| NCBI ID | WP_067634239.1 | Uniprot ID | A0A120JTZ9 |
| Organism | Erysipelothrix larvae strain LV19 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2350108..2360548
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOC36_RS10935 (AOC36_10915) | dnaB | 2350428..2351792 (-) | 1365 | WP_067634230.1 | replicative DNA helicase | - |
| AOC36_RS10940 (AOC36_10920) | rplI | 2351804..2352253 (-) | 450 | WP_067634232.1 | 50S ribosomal protein L9 | - |
| AOC36_RS10945 (AOC36_10925) | - | 2352255..2354213 (-) | 1959 | WP_067634233.1 | DHH family phosphoesterase | - |
| AOC36_RS10950 (AOC36_10930) | - | 2354264..2354800 (-) | 537 | WP_067634234.1 | DUF2232 domain-containing protein | - |
| AOC36_RS10955 (AOC36_10935) | rpsR | 2354855..2355088 (-) | 234 | WP_067634237.1 | 30S ribosomal protein S18 | - |
| AOC36_RS10960 (AOC36_10940) | ssbA | 2355108..2355548 (-) | 441 | WP_067634239.1 | single-stranded DNA-binding protein | Machinery gene |
| AOC36_RS10965 (AOC36_10945) | rpsF | 2355561..2355857 (-) | 297 | WP_067634241.1 | 30S ribosomal protein S6 | - |
| AOC36_RS10970 (AOC36_10950) | - | 2355999..2356313 (-) | 315 | WP_067634243.1 | hypothetical protein | - |
| AOC36_RS10975 (AOC36_10955) | - | 2356313..2356942 (-) | 630 | WP_067634246.1 | IspD/TarI family cytidylyltransferase | - |
| AOC36_RS10980 (AOC36_10960) | - | 2357067..2357636 (-) | 570 | WP_067634248.1 | NUDIX hydrolase | - |
| AOC36_RS12385 (AOC36_10965) | - | 2358400..2358870 (-) | 471 | WP_067634251.1 | helix-turn-helix domain-containing protein | - |
| AOC36_RS10990 (AOC36_10970) | - | 2359004..2359432 (-) | 429 | WP_067634253.1 | tyrosine-type recombinase/integrase | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 16242.05 Da Isoelectric Point: 4.6304
>NTDB_id=160680 AOC36_RS10960 WP_067634239.1 2355108..2355548(-) (ssbA) [Erysipelothrix larvae strain LV19]
MINRTILVGRITKDPELKKTNTGKSVVSFTIAVNRRFGGEQEQADFINCVAWNQQAEFLANYIPKGSLIGVEGRIQTRNY
EDATGKRVYVTEVVAENVQALESRAQRQEQQRQSSVAPSYSAPSEPSYDSVDDGPILDITSDDLPF
MINRTILVGRITKDPELKKTNTGKSVVSFTIAVNRRFGGEQEQADFINCVAWNQQAEFLANYIPKGSLIGVEGRIQTRNY
EDATGKRVYVTEVVAENVQALESRAQRQEQQRQSSVAPSYSAPSEPSYDSVDDGPILDITSDDLPF
Nucleotide
Download Length: 441 bp
>NTDB_id=160680 AOC36_RS10960 WP_067634239.1 2355108..2355548(-) (ssbA) [Erysipelothrix larvae strain LV19]
ATGATTAATCGCACAATATTGGTGGGTCGAATTACGAAAGACCCTGAATTGAAGAAAACGAATACCGGTAAATCCGTAGT
ATCGTTTACGATTGCTGTAAATCGTCGTTTTGGCGGTGAACAAGAGCAAGCAGATTTTATTAACTGCGTAGCTTGGAACC
AGCAAGCAGAATTCCTCGCTAATTATATTCCTAAAGGATCATTAATTGGTGTTGAAGGACGCATCCAAACAAGAAATTAT
GAAGATGCAACTGGAAAGCGTGTATATGTTACCGAAGTTGTCGCTGAAAATGTTCAAGCACTTGAGTCCCGTGCTCAACG
TCAAGAACAACAACGTCAAAGTTCTGTAGCACCATCATACAGTGCCCCAAGTGAACCATCTTACGATAGCGTAGATGATG
GTCCAATACTTGACATTACCAGTGATGATCTTCCATTCTAA
ATGATTAATCGCACAATATTGGTGGGTCGAATTACGAAAGACCCTGAATTGAAGAAAACGAATACCGGTAAATCCGTAGT
ATCGTTTACGATTGCTGTAAATCGTCGTTTTGGCGGTGAACAAGAGCAAGCAGATTTTATTAACTGCGTAGCTTGGAACC
AGCAAGCAGAATTCCTCGCTAATTATATTCCTAAAGGATCATTAATTGGTGTTGAAGGACGCATCCAAACAAGAAATTAT
GAAGATGCAACTGGAAAGCGTGTATATGTTACCGAAGTTGTCGCTGAAAATGTTCAAGCACTTGAGTCCCGTGCTCAACG
TCAAGAACAACAACGTCAAAGTTCTGTAGCACCATCATACAGTGCCCCAAGTGAACCATCTTACGATAGCGTAGATGATG
GTCCAATACTTGACATTACCAGTGATGATCTTCCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
44.134 |
100 |
0.541 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
45.029 |
100 |
0.527 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
55.455 |
75.342 |
0.418 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
54.545 |
75.342 |
0.411 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
54.545 |
75.342 |
0.411 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
54.545 |
75.342 |
0.411 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
54.545 |
75.342 |
0.411 |
| ssbB/cilA | Streptococcus mitis SK321 |
54.545 |
75.342 |
0.411 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
51.376 |
74.658 |
0.384 |
| ssbA | Streptococcus mutans UA159 |
47.414 |
79.452 |
0.377 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
51.402 |
73.288 |
0.377 |
| ssb | Vibrio cholerae strain A1552 |
29.944 |
100 |
0.363 |
| ssb | Neisseria meningitidis MC58 |
30.814 |
100 |
0.363 |