Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   DR75_RS16865 Genome accession   NZ_CP008816
Coordinates   1931148..1931429 (-) Length   93 a.a.
NCBI ID   WP_407854620.1    Uniprot ID   -
Organism   Enterococcus faecalis ATCC 29212     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1926148..1936429
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DR75_RS10195 (DR75_1883) - 1927779..1928150 (-) 372 WP_002354866.1 RicAFT regulatory complex protein RicA family protein -
  DR75_RS10200 (DR75_1884) - 1928238..1929035 (-) 798 WP_002354864.1 TIGR00282 family metallophosphoesterase -
  DR75_RS10205 (DR75_1885) rny 1929195..1930751 (-) 1557 WP_002354863.1 ribonuclease Y -
  DR75_RS16865 recA 1931148..1931429 (-) 282 WP_407854620.1 hypothetical protein Machinery gene
  DR75_RS10210 (DR75_1886) recA 1931372..1932193 (-) 822 WP_407854621.1 recombinase RecA Machinery gene
  DR75_RS10215 (DR75_1888) cinA 1932307..1933551 (-) 1245 WP_002354857.1 competence/damage-inducible protein A Machinery gene
  DR75_RS10220 (DR75_1889) - 1933743..1934942 (+) 1200 WP_002354856.1 hypothetical protein -
  DR75_RS10225 (DR75_1890) - 1935022..1935651 (-) 630 WP_002354854.1 NAD(P)-dependent oxidoreductase -
  DR75_RS10230 (DR75_1891) - 1935710..1936135 (-) 426 WP_002383201.1 Rrf2 family transcriptional regulator -

Sequence

Protein


Download         Length: 93 a.a.        Molecular weight: 10333.43 Da        Isoelectric Point: 3.9022

>NTDB_id=124484 DR75_RS16865 WP_407854620.1 1931148..1931429(-) (recA) [Enterococcus faecalis ATCC 29212]
MAEVDIMYGQGISQEGELLDMAVEKDLISKSGAWYGYKEERIGQGRENAKQYMADHPEMMAEVSKLVRDAYGIGDGSTIT
EEAEGQEELPLDE

Nucleotide


Download         Length: 282 bp        

>NTDB_id=124484 DR75_RS16865 WP_407854620.1 1931148..1931429(-) (recA) [Enterococcus faecalis ATCC 29212]
GTGGCAGAAGTTGATATCATGTATGGCCAAGGGATTTCCCAAGAAGGCGAATTACTAGATATGGCTGTGGAAAAAGACCT
TATCAGTAAAAGTGGTGCTTGGTATGGCTACAAAGAAGAACGAATTGGCCAAGGCCGTGAAAATGCTAAACAATACATGG
CGGATCATCCTGAAATGATGGCAGAAGTGTCTAAATTGGTCCGTGATGCATATGGCATCGGTGACGGTTCAACCATTACA
GAAGAAGCAGAAGGTCAAGAAGAATTACCCTTAGATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Latilactobacillus sakei subsp. sakei 23K

70.667

80.645

0.57
  recA Streptococcus pneumoniae Rx1

49.515

100

0.548
  recA Streptococcus pneumoniae D39

49.515

100

0.548
  recA Streptococcus pneumoniae R6

49.515

100

0.548
  recA Streptococcus pneumoniae TIGR4

49.515

100

0.548
  recA Streptococcus mitis NCTC 12261

56.25

86.022

0.484
  recA Streptococcus mitis SK321

58.667

80.645

0.473
  recA Streptococcus mutans UA159

45.652

98.925

0.452
  recA Lactococcus lactis subsp. cremoris KW2

50.633

84.946

0.43
  recA Streptococcus pyogenes NZ131

54.167

77.419

0.419
  recA Bacillus subtilis subsp. subtilis str. 168

50

83.871

0.419
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

44.186

92.473

0.409
  recA Ralstonia pseudosolanacearum GMI1000

43.529

91.398

0.398
  recA Neisseria gonorrhoeae MS11

47.222

77.419

0.366
  recA Neisseria gonorrhoeae MS11

47.222

77.419

0.366
  recA Neisseria gonorrhoeae strain FA1090

47.222

77.419

0.366

Multiple sequence alignment