Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | SPAP1_RS04275 | Genome accession | NZ_CP007537 |
| Coordinates | 827357..827782 (+) | Length | 141 a.a. |
| NCBI ID | WP_011285575.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain AP1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 822357..832782
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPAP1_RS04230 (SPAP1_04215) | - | 822786..823049 (+) | 264 | WP_029714276.1 | hypothetical protein | - |
| SPAP1_RS04235 (SPAP1_04220) | - | 823086..823382 (+) | 297 | WP_011054584.1 | MerR family transcriptional regulator | - |
| SPAP1_RS10580 | - | 823379..823513 (+) | 135 | WP_002995985.1 | hypothetical protein | - |
| SPAP1_RS04240 (SPAP1_04225) | - | 823529..823843 (+) | 315 | WP_023610888.1 | helix-turn-helix transcriptional regulator | - |
| SPAP1_RS04245 (SPAP1_04230) | - | 823857..824687 (+) | 831 | WP_009881060.1 | phage replisome organizer N-terminal domain-containing protein | - |
| SPAP1_RS04250 (SPAP1_04235) | - | 824674..825456 (+) | 783 | WP_011285581.1 | ATP-binding protein | - |
| SPAP1_RS04255 (SPAP1_04240) | - | 825597..825950 (+) | 354 | WP_011285579.1 | hypothetical protein | - |
| SPAP1_RS04260 (SPAP1_04245) | - | 825931..826185 (+) | 255 | WP_011018143.1 | hypothetical protein | - |
| SPAP1_RS04265 (SPAP1_04250) | - | 826207..826689 (+) | 483 | WP_011018142.1 | siphovirus Gp157 family protein | - |
| SPAP1_RS04270 (SPAP1_04255) | - | 826690..827364 (+) | 675 | WP_029714396.1 | ERF family protein | - |
| SPAP1_RS04275 (SPAP1_04260) | ssb | 827357..827782 (+) | 426 | WP_011285575.1 | single-stranded DNA-binding protein | Machinery gene |
| SPAP1_RS04280 (SPAP1_04265) | - | 827788..827991 (+) | 204 | WP_011106686.1 | hypothetical protein | - |
| SPAP1_RS04285 (SPAP1_04270) | - | 827991..828431 (+) | 441 | WP_011285574.1 | RusA family crossover junction endodeoxyribonuclease | - |
| SPAP1_RS04290 (SPAP1_04275) | - | 828428..828784 (+) | 357 | WP_011284873.1 | hypothetical protein | - |
| SPAP1_RS10645 (SPAP1_04280) | - | 828781..829026 (+) | 246 | WP_011285573.1 | hypothetical protein | - |
| SPAP1_RS04300 (SPAP1_04285) | - | 829133..829765 (+) | 633 | WP_011018133.1 | N-6 DNA methylase | - |
| SPAP1_RS04305 (SPAP1_04290) | - | 829768..830292 (+) | 525 | WP_011285572.1 | DUF1642 domain-containing protein | - |
| SPAP1_RS04310 (SPAP1_04295) | - | 830289..830555 (+) | 267 | WP_011018131.1 | hypothetical protein | - |
| SPAP1_RS04315 (SPAP1_04300) | - | 830841..831275 (+) | 435 | WP_011054810.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
| SPAP1_RS04320 (SPAP1_04305) | - | 831885..832265 (+) | 381 | WP_011285571.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15995.63 Da Isoelectric Point: 4.5748
>NTDB_id=120628 SPAP1_RS04275 WP_011285575.1 827357..827782(+) (ssb) [Streptococcus pyogenes strain AP1]
MINNIVLVGRMTKDAELRYTASQVAVATFTLAVNRRFKEQNGEREADFINCVIWRQSAENLANWAKKGALIGVTGRIQTR
NYENQQEQRVYVTEVVAESFQMLESRNSQQQSGQDNSSQNDNSQPFGNSNPMDISDDDLPF
MINNIVLVGRMTKDAELRYTASQVAVATFTLAVNRRFKEQNGEREADFINCVIWRQSAENLANWAKKGALIGVTGRIQTR
NYENQQEQRVYVTEVVAESFQMLESRNSQQQSGQDNSSQNDNSQPFGNSNPMDISDDDLPF
Nucleotide
Download Length: 426 bp
>NTDB_id=120628 SPAP1_RS04275 WP_011285575.1 827357..827782(+) (ssb) [Streptococcus pyogenes strain AP1]
ATGATTAACAACATTGTGCTAGTTGGTCGCATGACCAAGGACGCAGAGCTTCGCTATACAGCGAGTCAAGTAGCTGTAGC
TACGTTCACACTTGCGGTAAACCGCAGATTTAAAGAGCAAAACGGGGAGAGAGAAGCAGATTTCATTAACTGTGTTATCT
GGCGACAGTCTGCTGAAAATTTAGCCAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGAACAACGTGTCTATGTGACGGAAGTTGTTGCAGAGAGTTTCCAAATGTTGGAAAGTCGAAA
TAGCCAGCAACAATCTGGTCAAGATAACTCTTCGCAAAACGATAACAGTCAACCGTTTGGCAATTCAAACCCAATGGATA
TTTCAGACGATGATCTGCCGTTTTAA
ATGATTAACAACATTGTGCTAGTTGGTCGCATGACCAAGGACGCAGAGCTTCGCTATACAGCGAGTCAAGTAGCTGTAGC
TACGTTCACACTTGCGGTAAACCGCAGATTTAAAGAGCAAAACGGGGAGAGAGAAGCAGATTTCATTAACTGTGTTATCT
GGCGACAGTCTGCTGAAAATTTAGCCAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGAACAACGTGTCTATGTGACGGAAGTTGTTGCAGAGAGTTTCCAAATGTTGGAAAGTCGAAA
TAGCCAGCAACAATCTGGTCAAGATAACTCTTCGCAAAACGATAACAGTCAACCGTTTGGCAATTCAAACCCAATGGATA
TTTCAGACGATGATCTGCCGTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
55.294 |
100 |
0.667 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
54.07 |
100 |
0.66 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
43.972 |
100 |
0.44 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
43.262 |
100 |
0.433 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
43.262 |
100 |
0.433 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
43.262 |
100 |
0.433 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
43.262 |
100 |
0.433 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
43.262 |
100 |
0.433 |
| ssbB/cilA | Streptococcus mitis SK321 |
43.262 |
100 |
0.433 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
51.786 |
79.433 |
0.411 |
| ssbA | Streptococcus mutans UA159 |
40.426 |
100 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
29.379 |
100 |
0.369 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
49.524 |
74.468 |
0.369 |