Detailed information
Bioinformatically predicted
Overview
| Name | comGC/cglC | Type | Machinery gene |
| Locus tag | MMH06_RS03735 | Genome accession | NZ_OV904788 |
| Coordinates | 721904..722230 (+) | Length | 108 a.a. |
| NCBI ID | WP_000738650.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain RMV7 isolate RMV7domi | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 716904..727230
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MMH06_RS03710 (IONPJBJN_00729) | nagA | 717033..718184 (+) | 1152 | WP_001134457.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| MMH06_RS03715 (IONPJBJN_00730) | - | 718347..719405 (+) | 1059 | WP_000649468.1 | zinc-dependent alcohol dehydrogenase family protein | - |
| MMH06_RS03720 (IONPJBJN_00731) | - | 719556..719921 (+) | 366 | WP_000286415.1 | DUF1033 family protein | - |
| MMH06_RS03725 (IONPJBJN_00732) | comGA/cglA/cilD | 719997..720938 (+) | 942 | WP_000249567.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| MMH06_RS03730 (IONPJBJN_00733) | comGB/cglB | 720886..721902 (+) | 1017 | WP_013193332.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| MMH06_RS03735 (IONPJBJN_00734) | comGC/cglC | 721904..722230 (+) | 327 | WP_000738650.1 | comG operon protein ComGC | Machinery gene |
| MMH06_RS03740 (IONPJBJN_00735) | comGD/cglD | 722223..722627 (+) | 405 | WP_000588005.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| MMH06_RS03745 (IONPJBJN_00736) | comGE/cglE | 722590..722892 (+) | 303 | WP_000413380.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| MMH06_RS03750 (IONPJBJN_00737) | comGF/cglF | 722855..723316 (+) | 462 | WP_000250545.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| MMH06_RS03755 (IONPJBJN_00738) | comGG/cglG | 723294..723707 (+) | 414 | WP_000265630.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| MMH06_RS03760 (IONPJBJN_00739) | - | 723844..724431 (+) | 588 | WP_000679774.1 | class I SAM-dependent methyltransferase | - |
| MMH06_RS03765 (IONPJBJN_00740) | comYH | 724492..725445 (+) | 954 | WP_000345119.1 | class I SAM-dependent methyltransferase | Machinery gene |
| MMH06_RS03770 (IONPJBJN_00741) | - | 725496..726686 (+) | 1191 | WP_000167766.1 | acetate kinase | - |
| MMH06_RS10900 | - | 726687..726818 (+) | 132 | WP_000768904.1 | hypothetical protein | - |
| MMH06_RS03775 (IONPJBJN_00742) | rnpA | 726835..727206 (+) | 372 | WP_000739246.1 | ribonuclease P protein component | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12189.35 Da Isoelectric Point: 10.0523
>NTDB_id=1152085 MMH06_RS03735 WP_000738650.1 721904..722230(+) (comGC/cglC) [Streptococcus pneumoniae strain RMV7 isolate RMV7domi]
MKKMMTFLKKSKVKAFTLVEMLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLEKNEDASLSKLQA
DGRITEEQAKAYKEYHDKNGVANRKVND
MKKMMTFLKKSKVKAFTLVEMLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLEKNEDASLSKLQA
DGRITEEQAKAYKEYHDKNGVANRKVND
Nucleotide
Download Length: 327 bp
>NTDB_id=1152085 MMH06_RS03735 WP_000738650.1 721904..722230(+) (comGC/cglC) [Streptococcus pneumoniae strain RMV7 isolate RMV7domi]
ATGAAAAAAATGATGACATTCTTGAAAAAATCTAAGGTTAAAGCTTTTACATTGGTGGAGATGTTGGTGGTCTTGCTGAT
TATCAGCGTGCTTTTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAGGCAGTCAATGACAAAGGAAAAGCAGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAACTTTATAGCTTGGAAAAGAATGAAGATGCTAGCCTAAGCAAGTTACAAGCA
GATGGGCGAATCACGGAAGAACAGGCTAAAGCTTATAAAGAATACCATGATAAAAATGGAGTAGCAAATCGTAAAGTCAA
TGATTAA
ATGAAAAAAATGATGACATTCTTGAAAAAATCTAAGGTTAAAGCTTTTACATTGGTGGAGATGTTGGTGGTCTTGCTGAT
TATCAGCGTGCTTTTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAGGCAGTCAATGACAAAGGAAAAGCAGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAACTTTATAGCTTGGAAAAGAATGAAGATGCTAGCCTAAGCAAGTTACAAGCA
GATGGGCGAATCACGGAAGAACAGGCTAAAGCTTATAAAGAATACCATGATAAAAATGGAGTAGCAAATCGTAAAGTCAA
TGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC/cglC | Streptococcus pneumoniae Rx1 |
97.222 |
100 |
0.972 |
| comGC/cglC | Streptococcus pneumoniae D39 |
97.222 |
100 |
0.972 |
| comGC/cglC | Streptococcus pneumoniae R6 |
97.222 |
100 |
0.972 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
96.296 |
100 |
0.963 |
| comGC/cglC | Streptococcus mitis SK321 |
93.519 |
100 |
0.935 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
92.157 |
94.444 |
0.87 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
72.917 |
88.889 |
0.648 |
| comYC | Streptococcus mutans UA140 |
63.725 |
94.444 |
0.602 |
| comYC | Streptococcus mutans UA159 |
63.725 |
94.444 |
0.602 |
| comYC | Streptococcus suis isolate S10 |
70.37 |
75 |
0.528 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
54.902 |
94.444 |
0.519 |
| comGC | Staphylococcus aureus MW2 |
50 |
79.63 |
0.398 |
| comGC | Staphylococcus aureus N315 |
50 |
79.63 |
0.398 |
| comGC | Latilactobacillus sakei subsp. sakei 23K |
45.349 |
79.63 |
0.361 |