Detailed information NTG1152086

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: MMH06_RS03740
• Genome accession: NZ_OV904788
• Coordinates: 722223..722627 (+)
• Length: 134 a.a.
• NCBI ID: WP_000588005.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain RMV7 isolate RMV7domi
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 717223..727627

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MMH06_RS03715 (IONPJBJN_00730)	-	718347..719405 (+)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-
MMH06_RS03720 (IONPJBJN_00731)	-	719556..719921 (+)	366	WP_000286415.1	DUF1033 family protein	-
MMH06_RS03725 (IONPJBJN_00732)	comGA/cglA/cilD	719997..720938 (+)	942	WP_000249567.1	competence type IV pilus ATPase ComGA	Machinery gene
MMH06_RS03730 (IONPJBJN_00733)	comGB/cglB	720886..721902 (+)	1017	WP_013193332.1	competence type IV pilus assembly protein ComGB	Machinery gene
MMH06_RS03735 (IONPJBJN_00734)	comGC/cglC	721904..722230 (+)	327	WP_000738650.1	comG operon protein ComGC	Machinery gene
MMH06_RS03740 (IONPJBJN_00735)	comGD/cglD	722223..722627 (+)	405	WP_000588005.1	competence type IV pilus minor pilin ComGD	Machinery gene
MMH06_RS03745 (IONPJBJN_00736)	comGE/cglE	722590..722892 (+)	303	WP_000413380.1	competence type IV pilus minor pilin ComGE	Machinery gene
MMH06_RS03750 (IONPJBJN_00737)	comGF/cglF	722855..723316 (+)	462	WP_000250545.1	competence type IV pilus minor pilin ComGF	Machinery gene
MMH06_RS03755 (IONPJBJN_00738)	comGG/cglG	723294..723707 (+)	414	WP_000265630.1	competence type IV pilus minor pilin ComGG	Machinery gene
MMH06_RS03760 (IONPJBJN_00739)	-	723844..724431 (+)	588	WP_000679774.1	class I SAM-dependent methyltransferase	-
MMH06_RS03765 (IONPJBJN_00740)	comYH	724492..725445 (+)	954	WP_000345119.1	class I SAM-dependent methyltransferase	Machinery gene
MMH06_RS03770 (IONPJBJN_00741)	-	725496..726686 (+)	1191	WP_000167766.1	acetate kinase	-
MMH06_RS10900	-	726687..726818 (+)	132	WP_000768904.1	hypothetical protein	-
MMH06_RS03775 (IONPJBJN_00742)	rnpA	726835..727206 (+)	372	WP_000739246.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14636.81 Da
• Isoelectric Point: 10.2164

>NTDB_id=1152086 MMH06_RS03740 WP_000588005.1 722223..722627(+) (comGD/cglD) [Streptococcus pneumoniae strain RMV7 isolate RMV7domi]
MIKAFTMLESLLALSLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTISNGSQKLPV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=1152086 MMH06_RS03740 WP_000588005.1 722223..722627(+) (comGD/cglD) [Streptococcus pneumoniae strain RMV7 isolate RMV7domi]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGCTTTGAGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCAGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGATTAGCAATGGCAGTCAAAAGTTGCCAGTC
CCTAAAGGAATTCAGGCCCCATCAGGCCAAAGTATTACATTTGACCGTGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae Rx1	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae D39	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae R6	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.241	99.254	0.955
comGD/cglD	Streptococcus mitis SK321	95.522	100	0.955
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	50	95.522	0.478
comYD	Streptococcus mutans UA159	50	95.522	0.478