Detailed information
Bioinformatically predicted
Overview
| Name | comGC/cglC | Type | Machinery gene |
| Locus tag | DQM75_RS00730 | Genome accession | NZ_LS483380 |
| Coordinates | 126857..127180 (+) | Length | 107 a.a. |
| NCBI ID | WP_012514782.1 | Uniprot ID | B4U056 |
| Organism | Streptococcus equi subsp. zooepidemicus strain NCTC11824 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 121857..132180
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM75_RS00705 | - | 121862..122053 (+) | 192 | Protein_106 | lactococcin 972 family bacteriocin | - |
| DQM75_RS00710 (NCTC11824_00141) | - | 122118..124121 (+) | 2004 | WP_111692093.1 | DUF1430 domain-containing protein | - |
| DQM75_RS00715 (NCTC11824_00142) | - | 124123..124770 (+) | 648 | WP_111692094.1 | ABC transporter ATP-binding protein | - |
| DQM75_RS00720 (NCTC11824_00143) | comGA/cglA | 124951..125889 (+) | 939 | WP_111692095.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DQM75_RS00725 (NCTC11824_00144) | comYB | 125822..126856 (+) | 1035 | WP_337660733.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DQM75_RS00730 (NCTC11824_00145) | comGC/cglC | 126857..127180 (+) | 324 | WP_012514782.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DQM75_RS00735 (NCTC11824_00146) | comGD | 127158..127583 (+) | 426 | WP_111692097.1 | competence type IV pilus minor pilin ComGD | - |
| DQM75_RS00740 (NCTC11824_00147) | comGE | 127588..127830 (+) | 243 | WP_012677236.1 | competence type IV pilus minor pilin ComGE | - |
| DQM75_RS00745 (NCTC11824_00148) | comYF | 127817..128251 (+) | 435 | WP_037580631.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DQM75_RS00750 (NCTC11824_00149) | comGG | 128229..128591 (+) | 363 | WP_111692098.1 | competence type IV pilus minor pilin ComGG | - |
| DQM75_RS00755 (NCTC11824_00151) | - | 128659..130001 (+) | 1343 | WP_195759329.1 | IS3 family transposase | - |
| DQM75_RS00760 (NCTC11824_00152) | comYH | 130085..131038 (+) | 954 | WP_043029264.1 | class I SAM-dependent methyltransferase | Machinery gene |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12149.19 Da Isoelectric Point: 8.4057
>NTDB_id=1139315 DQM75_RS00730 WP_012514782.1 126857..127180(+) (comGC/cglC) [Streptococcus equi subsp. zooepidemicus strain NCTC11824]
MKMRLSILKDQGVQAFTLLEMLLVLLIISVLMLLFVPNLSKQKDKVTDTGNAAVVKLVENQAELYELSHGEKPSLKQLQE
DGSISDKQQKAYQDYYAKHKDEAKKLN
MKMRLSILKDQGVQAFTLLEMLLVLLIISVLMLLFVPNLSKQKDKVTDTGNAAVVKLVENQAELYELSHGEKPSLKQLQE
DGSISDKQQKAYQDYYAKHKDEAKKLN
Nucleotide
Download Length: 324 bp
>NTDB_id=1139315 DQM75_RS00730 WP_012514782.1 126857..127180(+) (comGC/cglC) [Streptococcus equi subsp. zooepidemicus strain NCTC11824]
ATGAAAATGAGATTATCAATCTTAAAAGATCAAGGTGTTCAGGCCTTCACTTTACTGGAAATGCTTCTGGTTTTGTTAAT
CATTAGTGTTTTGATGCTGTTATTTGTTCCAAATTTAAGTAAACAAAAGGATAAGGTGACAGACACAGGCAATGCTGCGG
TGGTAAAGCTGGTTGAAAATCAGGCAGAGCTTTATGAATTATCACATGGGGAAAAGCCAAGCCTGAAGCAGCTGCAAGAG
GATGGAAGTATCAGTGACAAGCAGCAAAAGGCTTATCAGGATTATTATGCAAAGCATAAAGATGAAGCTAAGAAGCTCAA
TTAA
ATGAAAATGAGATTATCAATCTTAAAAGATCAAGGTGTTCAGGCCTTCACTTTACTGGAAATGCTTCTGGTTTTGTTAAT
CATTAGTGTTTTGATGCTGTTATTTGTTCCAAATTTAAGTAAACAAAAGGATAAGGTGACAGACACAGGCAATGCTGCGG
TGGTAAAGCTGGTTGAAAATCAGGCAGAGCTTTATGAATTATCACATGGGGAAAAGCCAAGCCTGAAGCAGCTGCAAGAG
GATGGAAGTATCAGTGACAAGCAGCAAAAGGCTTATCAGGATTATTATGCAAAGCATAAAGATGAAGCTAAGAAGCTCAA
TTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC/cglC | Streptococcus mitis SK321 |
59.813 |
100 |
0.598 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
57.944 |
100 |
0.579 |
| comGC/cglC | Streptococcus pneumoniae D39 |
57.944 |
100 |
0.579 |
| comGC/cglC | Streptococcus pneumoniae R6 |
57.944 |
100 |
0.579 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
57.944 |
100 |
0.579 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
62.245 |
91.589 |
0.57 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
61.616 |
92.523 |
0.57 |
| comYC | Streptococcus mutans UA140 |
58.763 |
90.654 |
0.533 |
| comYC | Streptococcus mutans UA159 |
58.763 |
90.654 |
0.533 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
56.842 |
88.785 |
0.505 |
| comYC | Streptococcus suis isolate S10 |
60 |
74.766 |
0.449 |
| comGC | Staphylococcus aureus MW2 |
50 |
72.897 |
0.364 |
| comGC | Staphylococcus aureus N315 |
50 |
72.897 |
0.364 |