Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | Q426_RS00090 | Genome accession | NZ_CP006770 |
| Coordinates | 17296..17622 (+) | Length | 108 a.a. |
| NCBI ID | WP_014623503.1 | Uniprot ID | - |
| Organism | Streptococcus equi subsp. zooepidemicus CY | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 12296..22622
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Q426_RS00065 (Q426_00075) | - | 13304..14185 (+) | 882 | WP_014623510.1 | class II fructose-bisphosphate aldolase | - |
| Q426_RS00070 (Q426_00085) | - | 14775..15140 (+) | 366 | WP_012677371.1 | hypothetical protein | - |
| Q426_RS00075 (Q426_00090) | - | 15669..15959 (+) | 291 | WP_014623506.1 | hypothetical protein | - |
| Q426_RS00080 (Q426_00095) | - | 16025..16210 (+) | 186 | WP_014623505.1 | hypothetical protein | - |
| Q426_RS00085 (Q426_00100) | - | 16211..17299 (+) | 1089 | WP_014623504.1 | replication initiator protein A | - |
| Q426_RS00090 (Q426_00105) | ssbB | 17296..17622 (+) | 327 | WP_014623503.1 | single-stranded DNA-binding protein | Machinery gene |
| Q426_RS00095 (Q426_00110) | - | 17660..19945 (+) | 2286 | WP_038673952.1 | C39 family peptidase | - |
| Q426_RS00100 (Q426_00115) | - | 20313..20612 (+) | 300 | WP_038673954.1 | hypothetical protein | - |
| Q426_RS00105 (Q426_00120) | - | 20627..21265 (+) | 639 | WP_038673957.1 | LPXTG cell wall anchor domain-containing protein | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12254.07 Da Isoelectric Point: 10.0095
>NTDB_id=113874 Q426_RS00090 WP_014623503.1 17296..17622(+) (ssbB) [Streptococcus equi subsp. zooepidemicus CY]
MNNINLVGRLTKKAELYQTPDKKIYARFTLAINRKKKAGGSGNEADFIPCIIWGKAAENLVSWTDKGTLISLEGELRTRS
YDKDGQKHFVMEVWSTFFQVLSKPVTDN
MNNINLVGRLTKKAELYQTPDKKIYARFTLAINRKKKAGGSGNEADFIPCIIWGKAAENLVSWTDKGTLISLEGELRTRS
YDKDGQKHFVMEVWSTFFQVLSKPVTDN
Nucleotide
Download Length: 327 bp
>NTDB_id=113874 Q426_RS00090 WP_014623503.1 17296..17622(+) (ssbB) [Streptococcus equi subsp. zooepidemicus CY]
ATGAATAACATAAACCTAGTCGGTCGGCTAACTAAAAAAGCTGAACTCTATCAAACACCTGATAAGAAAATCTATGCTCG
CTTTACCCTAGCGATTAACCGCAAAAAGAAGGCAGGTGGTTCAGGAAACGAGGCTGACTTCATTCCCTGCATCATCTGGG
GGAAAGCAGCTGAAAACCTTGTCAGCTGGACCGACAAAGGAACGCTGATCAGTCTCGAGGGCGAGCTACGAACAAGGAGC
TATGACAAAGATGGTCAAAAGCATTTTGTCATGGAGGTTTGGTCAACCTTTTTCCAAGTCTTATCAAAGCCAGTTACTGA
CAATTAA
ATGAATAACATAAACCTAGTCGGTCGGCTAACTAAAAAAGCTGAACTCTATCAAACACCTGATAAGAAAATCTATGCTCG
CTTTACCCTAGCGATTAACCGCAAAAAGAAGGCAGGTGGTTCAGGAAACGAGGCTGACTTCATTCCCTGCATCATCTGGG
GGAAAGCAGCTGAAAACCTTGTCAGCTGGACCGACAAAGGAACGCTGATCAGTCTCGAGGGCGAGCTACGAACAAGGAGC
TATGACAAAGATGGTCAAAAGCATTTTGTCATGGAGGTTTGGTCAACCTTTTTCCAAGTCTTATCAAAGCCAGTTACTGA
CAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
48.598 |
99.074 |
0.481 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
48 |
92.593 |
0.444 |
| ssbA | Streptococcus mutans UA159 |
48 |
92.593 |
0.444 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
48 |
92.593 |
0.444 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
48 |
92.593 |
0.444 |
| ssbB/cilA | Streptococcus mitis SK321 |
48 |
92.593 |
0.444 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
47 |
92.593 |
0.435 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
47 |
92.593 |
0.435 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
47 |
92.593 |
0.435 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
44.118 |
94.444 |
0.417 |
| ssb | Staphylococcus aureus N315 |
38.889 |
100 |
0.389 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
39.252 |
99.074 |
0.389 |
| ssb | Staphylococcus aureus MW2 |
37.963 |
100 |
0.38 |