Detailed information NTG1132415

Bioinformatically predicted

Overview

• Name: pilA2
• Type: Machinery gene
• Locus tag: CFBP2533_RS06070
• Genome accession: NZ_LR828261
• Coordinates: 1458009..1458434 (+)
• Length: 141 a.a.
• NCBI ID: WP_168958950.1
• Uniprot ID: A0A6V7CDJ8
• Organism: Xanthomonas hortorum pv. pelargonii strain CFBP 2533 isolate Kemp 41
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1453009..1463434

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CFBP2533_RS06040 (CFBP2533_12220)	-	1453107..1453598 (-)	492	WP_168958945.1	GNAT family N-acetyltransferase	-
CFBP2533_RS06045 (CFBP2533_12230)	-	1453595..1453885 (-)	291	WP_168958946.1	DUF1778 domain-containing protein	-
CFBP2533_RS06050 (CFBP2533_12240)	-	1453961..1454362 (-)	402	WP_168958947.1	SymE family type I addiction module toxin	-
CFBP2533_RS06055 (CFBP2533_12270)	coaE	1454891..1455514 (-)	624	WP_168958948.1	dephospho-CoA kinase	-
CFBP2533_RS06060 (CFBP2533_12280)	-	1455528..1456391 (-)	864	WP_016849610.1	A24 family peptidase	-
CFBP2533_RS06065 (CFBP2533_12290)	pilC	1456398..1457657 (-)	1260	WP_168958949.1	type II secretion system F family protein	Machinery gene
CFBP2533_RS06070 (CFBP2533_12300)	pilA2	1458009..1458434 (+)	426	WP_168958950.1	pilin	Machinery gene
CFBP2533_RS06075 (CFBP2533_12310)	-	1458570..1460159 (+)	1590	WP_168958951.1	phosphoethanolamine transferase	-
CFBP2533_RS06080 (CFBP2533_12320)	-	1460230..1460799 (+)	570	WP_233366553.1	hypothetical protein	-
CFBP2533_RS06085 (CFBP2533_12330)	-	1460769..1462295 (+)	1527	WP_168958953.1	hypothetical protein	-

Sequence

Protein

• Length: 141 a.a.
• Molecular weight: 14385.63 Da
• Isoelectric Point: 9.0171

>NTDB_id=1132415 CFBP2533_RS06070 WP_168958950.1 1458009..1458434(+) (pilA2) [Xanthomonas hortorum pv. pelargonii strain CFBP 2533 isolate Kemp 41]
MKKQQGFTLIELMIVVAIIAILAAIALPAYQDYTTRAKLSEALTMSAPAKLAVTETSSSLGGLAQVTAANSGYAFPGATK
YVSGIAITSATGQVAVTSTVPNATGTILLTPTDVGGGQLKWTCSSAINVKYLPAECRNSGT

Nucleotide

• Length: 426 bp

>NTDB_id=1132415 CFBP2533_RS06070 WP_168958950.1 1458009..1458434(+) (pilA2) [Xanthomonas hortorum pv. pelargonii strain CFBP 2533 isolate Kemp 41]
ATGAAGAAGCAGCAAGGCTTTACACTTATCGAACTGATGATCGTGGTCGCGATCATCGCCATCCTGGCCGCCATCGCGCT
GCCGGCTTATCAGGACTACACCACTCGCGCCAAGCTCAGTGAAGCGCTGACGATGTCGGCGCCTGCCAAGCTTGCGGTAA
CTGAGACTTCATCGTCGCTCGGCGGCCTCGCTCAGGTTACTGCGGCAAATTCGGGCTACGCATTCCCGGGTGCCACGAAG
TATGTCAGCGGCATCGCCATCACCAGTGCTACGGGCCAAGTCGCTGTAACCTCCACCGTGCCGAACGCAACCGGTACCAT
CCTGCTGACCCCGACTGATGTCGGTGGTGGCCAGCTGAAGTGGACCTGCTCTTCCGCCATCAACGTCAAGTACCTGCCGG
CGGAGTGCCGTAACTCGGGCACCTGA

Domains

Predicted by InterproScan.

• Pilin (bacterial filament) (Pilin) (35-137)

• Prokaryotic N-terminal methylation motif (N_methyl) (1-27)

3D structure

• AlphaFold DB: A0A6V7CDJ8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA2	Legionella pneumophila str. Paris	52.941	96.454	0.511
pilA2	Legionella pneumophila strain ERS1305867	52.941	96.454	0.511
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	36.216	100	0.475
pilA	Ralstonia pseudosolanacearum GMI1000	39.634	100	0.461
comP	Acinetobacter baylyi ADP1	43.537	100	0.454
pilA/pilAI	Pseudomonas stutzeri DSM 10701	42.754	97.872	0.418
pilE	Neisseria gonorrhoeae strain FA1090	37.342	100	0.418
pilA/pilA1	Eikenella corrodens VA1	39.333	100	0.418
pilA/pilAII	Pseudomonas stutzeri DSM 10701	41.606	97.163	0.404
pilE	Neisseria gonorrhoeae MS11	35.625	100	0.404
pilA	Pseudomonas aeruginosa PAK	35.065	100	0.383
pilA	Acinetobacter baumannii strain A118	36.111	100	0.369