Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FQT45_RS08620 | Genome accession | NZ_LR595858 |
| Coordinates | 1756900..1757307 (-) | Length | 135 a.a. |
| NCBI ID | WP_077322796.1 | Uniprot ID | A0A4U9Y1T5 |
| Organism | Streptococcus pseudoporcinus strain NCTC10228 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1728244..1772032 | 1756900..1757307 | within | 0 |
Gene organization within MGE regions
Location: 1728244..1772032
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FQT45_RS08435 (NCTC10228_01735) | - | 1728469..1728729 (-) | 261 | WP_232036636.1 | hypothetical protein | - |
| FQT45_RS08440 (NCTC10228_01736) | - | 1728910..1729977 (-) | 1068 | WP_077322830.1 | SH3 domain-containing protein | - |
| FQT45_RS08445 (NCTC10228_01737) | - | 1729991..1730326 (-) | 336 | WP_077322829.1 | phage holin | - |
| FQT45_RS08450 (NCTC10228_01738) | - | 1730323..1730676 (-) | 354 | WP_077322828.1 | hypothetical protein | - |
| FQT45_RS10500 (NCTC10228_01739) | - | 1730687..1730842 (-) | 156 | WP_171011224.1 | hypothetical protein | - |
| FQT45_RS08455 (NCTC10228_01740) | - | 1730858..1731262 (-) | 405 | WP_077322827.1 | DUF1366 domain-containing protein | - |
| FQT45_RS10505 (NCTC10228_01741) | - | 1731264..1731401 (-) | 138 | WP_171011240.1 | hypothetical protein | - |
| FQT45_RS10710 (NCTC10228_01742) | - | 1731417..1735349 (-) | 3933 | WP_077322826.1 | gp58-like family protein | - |
| FQT45_RS08470 (NCTC10228_01743) | - | 1735350..1736834 (-) | 1485 | WP_077322825.1 | distal tail protein Dit | - |
| FQT45_RS08475 (NCTC10228_01744) | - | 1736838..1740980 (-) | 4143 | WP_077322824.1 | phage tail tape measure protein | - |
| FQT45_RS08480 (NCTC10228_01745) | gpG | 1741199..1741528 (-) | 330 | WP_077322823.1 | phage tail assembly chaperone G | - |
| FQT45_RS08485 (NCTC10228_01746) | - | 1741582..1742142 (-) | 561 | WP_077322822.1 | major tail protein | - |
| FQT45_RS08490 (NCTC10228_01747) | - | 1742164..1742589 (-) | 426 | WP_077322821.1 | hypothetical protein | - |
| FQT45_RS08495 (NCTC10228_01748) | - | 1742586..1742963 (-) | 378 | WP_077322820.1 | HK97-gp10 family putative phage morphogenesis protein | - |
| FQT45_RS08500 (NCTC10228_01749) | - | 1742960..1743295 (-) | 336 | WP_077322819.1 | phage head closure protein | - |
| FQT45_RS08505 (NCTC10228_01750) | - | 1743292..1743606 (-) | 315 | WP_077322818.1 | head-tail connector protein | - |
| FQT45_RS08510 (NCTC10228_01751) | - | 1743741..1744913 (-) | 1173 | WP_077322817.1 | phage major capsid protein | - |
| FQT45_RS08515 (NCTC10228_01752) | - | 1744951..1745604 (-) | 654 | WP_138068304.1 | head maturation protease, ClpP-related | - |
| FQT45_RS08520 (NCTC10228_01753) | - | 1745582..1746787 (-) | 1206 | WP_077322816.1 | phage portal protein | - |
| FQT45_RS08525 (NCTC10228_01754) | - | 1746980..1747264 (-) | 285 | WP_077322815.1 | hypothetical protein | - |
| FQT45_RS08530 (NCTC10228_01755) | - | 1747266..1747502 (-) | 237 | WP_077322814.1 | hypothetical protein | - |
| FQT45_RS10515 (NCTC10228_01756) | - | 1747506..1747664 (-) | 159 | WP_171011239.1 | hypothetical protein | - |
| FQT45_RS08535 (NCTC10228_01757) | - | 1747664..1749364 (-) | 1701 | WP_138068302.1 | terminase large subunit | - |
| FQT45_RS08540 (NCTC10228_01758) | - | 1749395..1749625 (-) | 231 | WP_077322812.1 | hypothetical protein | - |
| FQT45_RS08545 (NCTC10228_01759) | - | 1749628..1750095 (-) | 468 | WP_077322811.1 | phage terminase small subunit P27 family | - |
| FQT45_RS08550 (NCTC10228_01760) | - | 1750255..1750593 (-) | 339 | WP_077322810.1 | HNH endonuclease | - |
| FQT45_RS08555 (NCTC10228_01761) | - | 1750762..1751091 (-) | 330 | WP_077322809.1 | hypothetical protein | - |
| FQT45_RS08560 (NCTC10228_01763) | - | 1751887..1752321 (-) | 435 | WP_077322808.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
| FQT45_RS08565 (NCTC10228_01764) | - | 1752584..1752880 (-) | 297 | WP_077322807.1 | hypothetical protein | - |
| FQT45_RS08570 (NCTC10228_01765) | - | 1752897..1753268 (-) | 372 | WP_077322806.1 | hypothetical protein | - |
| FQT45_RS08575 (NCTC10228_01766) | - | 1753265..1753453 (-) | 189 | WP_077322805.1 | hypothetical protein | - |
| FQT45_RS10525 (NCTC10228_01767) | - | 1753450..1753623 (-) | 174 | WP_171011238.1 | hypothetical protein | - |
| FQT45_RS08580 (NCTC10228_01768) | - | 1753620..1754201 (-) | 582 | WP_077322804.1 | DUF1642 domain-containing protein | - |
| FQT45_RS10530 (NCTC10228_01769) | - | 1754214..1754381 (-) | 168 | WP_171011237.1 | hypothetical protein | - |
| FQT45_RS08585 (NCTC10228_01770) | - | 1754384..1754866 (-) | 483 | WP_077322803.1 | class I SAM-dependent methyltransferase | - |
| FQT45_RS08590 (NCTC10228_01771) | - | 1754868..1755092 (-) | 225 | WP_077322802.1 | hypothetical protein | - |
| FQT45_RS10765 (NCTC10228_01772) | - | 1755089..1755217 (-) | 129 | WP_257617284.1 | hypothetical protein | - |
| FQT45_RS08595 (NCTC10228_01773) | - | 1755214..1755423 (-) | 210 | WP_077322801.1 | hypothetical protein | - |
| FQT45_RS08600 (NCTC10228_01774) | - | 1755420..1755638 (-) | 219 | WP_077322800.1 | hypothetical protein | - |
| FQT45_RS08605 (NCTC10228_01775) | - | 1755635..1756018 (-) | 384 | WP_077322799.1 | YopX family protein | - |
| FQT45_RS08610 (NCTC10228_01776) | - | 1756031..1756546 (-) | 516 | WP_077322798.1 | hypothetical protein | - |
| FQT45_RS08615 (NCTC10228_01777) | - | 1756543..1756884 (-) | 342 | WP_077322797.1 | hypothetical protein | - |
| FQT45_RS08620 (NCTC10228_01778) | ssb | 1756900..1757307 (-) | 408 | WP_077322796.1 | single-stranded DNA-binding protein | Machinery gene |
| FQT45_RS08625 (NCTC10228_01779) | - | 1757310..1758134 (-) | 825 | WP_172604991.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| FQT45_RS08630 (NCTC10228_01780) | - | 1758112..1758933 (-) | 822 | WP_077322795.1 | recombinase RecT | - |
| FQT45_RS08635 (NCTC10228_01781) | - | 1758938..1759198 (-) | 261 | WP_077322794.1 | hypothetical protein | - |
| FQT45_RS08640 (NCTC10228_01782) | - | 1759191..1759535 (-) | 345 | WP_077322793.1 | hypothetical protein | - |
| FQT45_RS08645 (NCTC10228_01784) | - | 1759673..1760455 (-) | 783 | WP_077322792.1 | ATP-binding protein | - |
| FQT45_RS08650 (NCTC10228_01785) | - | 1760442..1761119 (-) | 678 | WP_171011235.1 | DnaD domain-containing protein | - |
| FQT45_RS08655 (NCTC10228_01786) | - | 1761236..1761679 (-) | 444 | WP_012560973.1 | hypothetical protein | - |
| FQT45_RS08660 (NCTC10228_01787) | - | 1761735..1762115 (+) | 381 | WP_077322791.1 | hypothetical protein | - |
| FQT45_RS08665 (NCTC10228_01788) | - | 1762105..1762377 (-) | 273 | WP_000370473.1 | hypothetical protein | - |
| FQT45_RS08670 (NCTC10228_01789) | - | 1762550..1762729 (-) | 180 | WP_012560974.1 | hypothetical protein | - |
| FQT45_RS10535 (NCTC10228_01790) | - | 1762856..1762993 (-) | 138 | WP_172604992.1 | hypothetical protein | - |
| FQT45_RS08675 (NCTC10228_01791) | - | 1762990..1763265 (-) | 276 | WP_046176841.1 | DNA-binding phage protein | - |
| FQT45_RS08680 (NCTC10228_01792) | - | 1763376..1763600 (+) | 225 | WP_077322790.1 | DUF2188 domain-containing protein | - |
| FQT45_RS08685 (NCTC10228_01793) | - | 1763597..1763740 (-) | 144 | WP_142355097.1 | hypothetical protein | - |
| FQT45_RS08690 (NCTC10228_01794) | - | 1763770..1764498 (-) | 729 | WP_077322789.1 | phage antirepressor KilAC domain-containing protein | - |
| FQT45_RS08695 (NCTC10228_01795) | - | 1764547..1764735 (-) | 189 | WP_001166512.1 | helix-turn-helix transcriptional regulator | - |
| FQT45_RS08700 (NCTC10228_01796) | - | 1764875..1765033 (-) | 159 | WP_142355098.1 | hypothetical protein | - |
| FQT45_RS10540 (NCTC10228_01797) | - | 1765091..1765261 (+) | 171 | WP_001097075.1 | hypothetical protein | - |
| FQT45_RS08705 (NCTC10228_01798) | - | 1765245..1765538 (-) | 294 | WP_077322788.1 | ImmA/IrrE family metallo-endopeptidase | - |
| FQT45_RS08710 (NCTC10228_01799) | - | 1765894..1766673 (+) | 780 | WP_077322787.1 | XRE family transcriptional regulator | - |
| FQT45_RS08715 (NCTC10228_01801) | - | 1766894..1767427 (+) | 534 | WP_077322786.1 | hypothetical protein | - |
| FQT45_RS08720 (NCTC10228_01802) | - | 1767534..1768604 (+) | 1071 | WP_077322785.1 | site-specific integrase | - |
| FQT45_RS08730 (NCTC10228_01804) | trmB | 1768783..1769418 (-) | 636 | WP_007892080.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| FQT45_RS08735 (NCTC10228_01805) | ccrZ | 1769418..1770209 (-) | 792 | WP_077322784.1 | cell cycle regulator CcrZ | - |
| FQT45_RS08740 (NCTC10228_01806) | - | 1770270..1771304 (-) | 1035 | WP_077322783.1 | ABC transporter permease | - |
| FQT45_RS08745 (NCTC10228_01807) | pptA | 1771307..1772032 (-) | 726 | WP_077322782.1 | ABC transporter ATP-binding protein | Regulator |
Sequence
Protein
Download Length: 135 a.a. Molecular weight: 14989.61 Da Isoelectric Point: 4.9230
>NTDB_id=1128497 FQT45_RS08620 WP_077322796.1 1756900..1757307(-) (ssb) [Streptococcus pseudoporcinus strain NCTC10228]
MNNVSLVGRLTRDVELKYTNSQTAVATGTLAVNRTFKSQNGEREADFINIVAWRKTAEILSNYTSKGSQVGVVGRIQTRN
YEGNDGKRVYVTEVVAESVALLDNRSINEQQPVQKQEAPFSNSSSMEIDESDLPF
MNNVSLVGRLTRDVELKYTNSQTAVATGTLAVNRTFKSQNGEREADFINIVAWRKTAEILSNYTSKGSQVGVVGRIQTRN
YEGNDGKRVYVTEVVAESVALLDNRSINEQQPVQKQEAPFSNSSSMEIDESDLPF
Nucleotide
Download Length: 408 bp
>NTDB_id=1128497 FQT45_RS08620 WP_077322796.1 1756900..1757307(-) (ssb) [Streptococcus pseudoporcinus strain NCTC10228]
ATGAATAACGTAAGTTTAGTAGGACGATTAACAAGAGATGTAGAACTTAAATACACAAACTCACAAACAGCAGTCGCAAC
AGGAACATTAGCTGTTAACCGTACCTTTAAAAGCCAAAACGGTGAACGTGAGGCTGATTTTATTAATATTGTAGCGTGGA
GAAAAACTGCTGAAATTCTATCCAACTACACTTCTAAAGGTTCCCAAGTTGGAGTTGTCGGGAGAATTCAAACACGAAAC
TACGAAGGTAATGACGGAAAACGTGTATATGTAACAGAAGTTGTAGCGGAATCAGTAGCATTACTTGATAACCGATCAAT
AAACGAGCAACAGCCTGTGCAAAAACAAGAAGCACCTTTTAGTAATTCAAGTTCAATGGAAATTGACGAATCTGATTTGC
CATTTTAA
ATGAATAACGTAAGTTTAGTAGGACGATTAACAAGAGATGTAGAACTTAAATACACAAACTCACAAACAGCAGTCGCAAC
AGGAACATTAGCTGTTAACCGTACCTTTAAAAGCCAAAACGGTGAACGTGAGGCTGATTTTATTAATATTGTAGCGTGGA
GAAAAACTGCTGAAATTCTATCCAACTACACTTCTAAAGGTTCCCAAGTTGGAGTTGTCGGGAGAATTCAAACACGAAAC
TACGAAGGTAATGACGGAAAACGTGTATATGTAACAGAAGTTGTAGCGGAATCAGTAGCATTACTTGATAACCGATCAAT
AAACGAGCAACAGCCTGTGCAAAAACAAGAAGCACCTTTTAGTAATTCAAGTTCAATGGAAATTGACGAATCTGATTTGC
CATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.154 |
100 |
0.578 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
64.078 |
76.296 |
0.489 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
45.522 |
99.259 |
0.452 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.143 |
77.778 |
0.444 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
43.284 |
99.259 |
0.43 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
43.284 |
99.259 |
0.43 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
42.537 |
99.259 |
0.422 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
42.537 |
99.259 |
0.422 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
42.537 |
99.259 |
0.422 |
| ssbB/cilA | Streptococcus mitis SK321 |
42.537 |
99.259 |
0.422 |
| ssbA | Streptococcus mutans UA159 |
40.299 |
99.259 |
0.4 |
| ssb | Neisseria meningitidis MC58 |
32.237 |
100 |
0.363 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
46.226 |
78.519 |
0.363 |