Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | E5P3_RS29290 | Genome accession | NZ_LR594662 |
| Coordinates | 6148211..6148657 (+) | Length | 148 a.a. |
| NCBI ID | WP_162589163.1 | Uniprot ID | A0A6P2FGP7 |
| Organism | Variovorax sp. RA8 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6143211..6153657
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5P3_RS29270 (G3W91_RS29270) | - | 6143341..6144150 (+) | 810 | WP_162589159.1 | Stp1/IreP family PP2C-type Ser/Thr phosphatase | - |
| E5P3_RS29275 (G3W91_RS29275) | - | 6144219..6144869 (+) | 651 | WP_162589160.1 | FHA domain-containing protein | - |
| E5P3_RS29280 (G3W91_RS29280) | - | 6144909..6147185 (+) | 2277 | WP_162589161.1 | adenylate/guanylate cyclase domain-containing protein | - |
| E5P3_RS29285 (G3W91_RS29285) | - | 6147199..6148008 (+) | 810 | WP_162589162.1 | 3',5'-cyclic-nucleotide phosphodiesterase | - |
| E5P3_RS29290 (G3W91_RS29290) | pilA2 | 6148211..6148657 (+) | 447 | WP_162589163.1 | pilin | Machinery gene |
| E5P3_RS29295 (G3W91_RS29295) | - | 6148754..6150097 (+) | 1344 | WP_162589164.1 | O-antigen ligase family protein | - |
| E5P3_RS29300 (G3W91_RS29300) | - | 6150125..6151876 (+) | 1752 | WP_162589165.1 | O-antigen ligase family protein | - |
Sequence
Protein
Download Length: 148 a.a. Molecular weight: 15370.74 Da Isoelectric Point: 9.4794
>NTDB_id=1128197 E5P3_RS29290 WP_162589163.1 6148211..6148657(+) (pilA2) [Variovorax sp. RA8]
MNRRSIARNVQKGFTLIELMIVVAIIGILAAVALPAYQDYTTRAKISEVIVMGAPAKLAVAETTSSLGLLSSVTASNSGY
TFPGATKYVSNVAITDSTGVVTVTSTVPNATGDIVLTPTTVGSNTGQLRWTCTSAIAAKYLPSECRPT
MNRRSIARNVQKGFTLIELMIVVAIIGILAAVALPAYQDYTTRAKISEVIVMGAPAKLAVAETTSSLGLLSSVTASNSGY
TFPGATKYVSNVAITDSTGVVTVTSTVPNATGDIVLTPTTVGSNTGQLRWTCTSAIAAKYLPSECRPT
Nucleotide
Download Length: 447 bp
>NTDB_id=1128197 E5P3_RS29290 WP_162589163.1 6148211..6148657(+) (pilA2) [Variovorax sp. RA8]
ATGAACCGTCGTTCTATCGCACGCAATGTGCAAAAGGGTTTCACTCTTATCGAACTGATGATCGTTGTGGCGATCATTGG
TATCTTGGCAGCTGTGGCGCTGCCGGCTTATCAGGACTACACGACGCGTGCCAAGATCTCTGAAGTGATCGTTATGGGCG
CCCCGGCTAAGCTCGCAGTCGCTGAAACGACGTCGTCGCTCGGCCTTTTGAGCAGCGTCACCGCATCCAATAGCGGCTAC
ACCTTTCCTGGCGCAACAAAATATGTGTCAAATGTCGCCATCACTGATTCCACGGGCGTCGTGACGGTCACCTCGACGGT
TCCCAATGCGACGGGCGACATCGTCCTGACTCCCACGACCGTTGGTTCGAACACCGGCCAGCTGCGTTGGACGTGCACCT
CCGCCATTGCTGCTAAATACCTCCCTTCCGAGTGCCGCCCCACCTGA
ATGAACCGTCGTTCTATCGCACGCAATGTGCAAAAGGGTTTCACTCTTATCGAACTGATGATCGTTGTGGCGATCATTGG
TATCTTGGCAGCTGTGGCGCTGCCGGCTTATCAGGACTACACGACGCGTGCCAAGATCTCTGAAGTGATCGTTATGGGCG
CCCCGGCTAAGCTCGCAGTCGCTGAAACGACGTCGTCGCTCGGCCTTTTGAGCAGCGTCACCGCATCCAATAGCGGCTAC
ACCTTTCCTGGCGCAACAAAATATGTGTCAAATGTCGCCATCACTGATTCCACGGGCGTCGTGACGGTCACCTCGACGGT
TCCCAATGCGACGGGCGACATCGTCCTGACTCCCACGACCGTTGGTTCGAACACCGGCCAGCTGCGTTGGACGTGCACCT
CCGCCATTGCTGCTAAATACCTCCCTTCCGAGTGCCGCCCCACCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
52.174 |
93.243 |
0.486 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
51.449 |
93.243 |
0.48 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
40.828 |
100 |
0.466 |
| comP | Acinetobacter baylyi ADP1 |
45.27 |
100 |
0.453 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
35.106 |
100 |
0.446 |
| pilA/pilA1 | Eikenella corrodens VA1 |
39.024 |
100 |
0.432 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
39.623 |
100 |
0.426 |
| pilE | Neisseria gonorrhoeae MS11 |
38.994 |
100 |
0.419 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
38 |
100 |
0.385 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
41.481 |
91.216 |
0.378 |
| pilA | Pseudomonas aeruginosa PAK |
35.948 |
100 |
0.372 |
| pilA | Acinetobacter baumannii strain A118 |
37.162 |
100 |
0.372 |