Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | EL220_RS12235 | Genome accession | NZ_LR134388 |
| Coordinates | 2766858..2767289 (+) | Length | 143 a.a. |
| NCBI ID | WP_027270256.1 | Uniprot ID | A0A0W0YGS3 |
| Organism | Legionella sainthelensi strain NCTC11988 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2761858..2772289
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL220_RS12225 (NCTC11988_02575) | letS | 2762548..2765283 (+) | 2736 | WP_128130908.1 | two-component system sensor histidine kinase LetS | Regulator |
| EL220_RS12230 (NCTC11988_02576) | - | 2765324..2766568 (+) | 1245 | WP_027270255.1 | 6-phosphofructokinase | - |
| EL220_RS12235 (NCTC11988_02577) | pilA2 | 2766858..2767289 (+) | 432 | WP_027270256.1 | pilin | Machinery gene |
| EL220_RS12240 (NCTC11988_02578) | - | 2767376..2767699 (+) | 324 | WP_027270257.1 | BolA family protein | - |
| EL220_RS12245 (NCTC11988_02579) | - | 2767864..2769264 (+) | 1401 | WP_027270258.1 | APC family permease | - |
| EL220_RS12250 (NCTC11988_02580) | - | 2769429..2769608 (-) | 180 | WP_027270259.1 | Trm112 family protein | - |
| EL220_RS12255 (NCTC11988_02581) | tsaB | 2769618..2770268 (-) | 651 | WP_027270260.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | - |
| EL220_RS12260 (NCTC11988_02582) | - | 2770249..2772204 (-) | 1956 | WP_027270261.1 | ATP-dependent DNA helicase | - |
Sequence
Protein
Download Length: 143 a.a. Molecular weight: 14647.84 Da Isoelectric Point: 6.2100
>NTDB_id=1122628 EL220_RS12235 WP_027270256.1 2766858..2767289(+) (pilA2) [Legionella sainthelensi strain NCTC11988]
MKQKGFTLIELMIVVAIIGILAAIAIPAYQDYVVRARVTEGLSLASAAKTTVSENASSGAAKLGQGWVAPTATANVKSVA
VDDNTGVITITYDAPAKSIVITLTPQSGGAALVAGTPPTDAITWTCAVDQAANDRYVPSNCRI
MKQKGFTLIELMIVVAIIGILAAIAIPAYQDYVVRARVTEGLSLASAAKTTVSENASSGAAKLGQGWVAPTATANVKSVA
VDDNTGVITITYDAPAKSIVITLTPQSGGAALVAGTPPTDAITWTCAVDQAANDRYVPSNCRI
Nucleotide
Download Length: 432 bp
>NTDB_id=1122628 EL220_RS12235 WP_027270256.1 2766858..2767289(+) (pilA2) [Legionella sainthelensi strain NCTC11988]
ATGAAGCAAAAAGGTTTTACTTTAATTGAATTGATGATAGTAGTGGCAATCATTGGAATTCTCGCCGCAATAGCGATTCC
CGCATATCAAGACTATGTCGTTAGAGCTCGTGTTACGGAAGGATTAAGCCTTGCCTCTGCAGCAAAAACGACAGTTTCTG
AGAACGCATCAAGTGGCGCTGCGAAATTAGGTCAGGGCTGGGTTGCCCCTACAGCAACTGCTAATGTAAAAAGCGTTGCT
GTTGATGATAATACGGGAGTAATCACTATCACTTATGATGCGCCGGCAAAAAGTATCGTTATTACTTTAACCCCACAATC
TGGTGGTGCAGCTCTTGTTGCTGGTACCCCGCCAACAGATGCTATTACCTGGACTTGTGCGGTTGATCAGGCTGCAAACG
ACCGATATGTTCCGTCCAATTGCCGTATTTAG
ATGAAGCAAAAAGGTTTTACTTTAATTGAATTGATGATAGTAGTGGCAATCATTGGAATTCTCGCCGCAATAGCGATTCC
CGCATATCAAGACTATGTCGTTAGAGCTCGTGTTACGGAAGGATTAAGCCTTGCCTCTGCAGCAAAAACGACAGTTTCTG
AGAACGCATCAAGTGGCGCTGCGAAATTAGGTCAGGGCTGGGTTGCCCCTACAGCAACTGCTAATGTAAAAAGCGTTGCT
GTTGATGATAATACGGGAGTAATCACTATCACTTATGATGCGCCGGCAAAAAGTATCGTTATTACTTTAACCCCACAATC
TGGTGGTGCAGCTCTTGTTGCTGGTACCCCGCCAACAGATGCTATTACCTGGACTTGTGCGGTTGATCAGGCTGCAAACG
ACCGATATGTTCCGTCCAATTGCCGTATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila strain ERS1305867 |
54.054 |
100 |
0.559 |
| pilA2 | Legionella pneumophila str. Paris |
54.054 |
100 |
0.559 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
49.045 |
100 |
0.538 |
| comP | Acinetobacter baylyi ADP1 |
48.387 |
100 |
0.524 |
| pilA/pilA1 | Eikenella corrodens VA1 |
42.138 |
100 |
0.469 |
| pilA | Pseudomonas aeruginosa PAK |
41.892 |
100 |
0.434 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
36.42 |
100 |
0.413 |
| pilA | Acinetobacter baumannii strain A118 |
39.865 |
100 |
0.413 |
| pilE | Neisseria gonorrhoeae MS11 |
36.025 |
100 |
0.406 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
37.5 |
100 |
0.378 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
37.762 |
100 |
0.378 |