Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | ACBO77_RS18480 | Genome accession | NZ_CP182134 |
| Coordinates | 4303030..4304163 (+) | Length | 377 a.a. |
| NCBI ID | WP_016900968.1 | Uniprot ID | A0A2N7V1C6 |
| Organism | Xanthomonas arboricola pv. pruni strain Xap 9-4 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4298030..4309163
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACBO77_RS18455 | - | 4298128..4299348 (-) | 1221 | WP_039513647.1 | cystathionine gamma-synthase | - |
| ACBO77_RS18460 | - | 4299438..4300808 (-) | 1371 | WP_039513649.1 | pyridoxal-phosphate dependent enzyme | - |
| ACBO77_RS18465 | - | 4301097..4301315 (-) | 219 | WP_002814034.1 | YdcH family protein | - |
| ACBO77_RS18470 | - | 4301661..4302551 (-) | 891 | WP_043087326.1 | membrane protein | - |
| ACBO77_RS18475 | - | 4302548..4302931 (-) | 384 | WP_039512967.1 | DUF4398 domain-containing protein | - |
| ACBO77_RS18480 | pilU | 4303030..4304163 (+) | 1134 | WP_016900968.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| ACBO77_RS18485 | maiA | 4304447..4305112 (-) | 666 | WP_039512969.1 | maleylacetoacetate isomerase | - |
| ACBO77_RS18490 | - | 4305156..4306214 (-) | 1059 | WP_172454165.1 | fumarylacetoacetate hydrolase family protein | - |
| ACBO77_RS18495 | - | 4306523..4307911 (+) | 1389 | WP_016900971.1 | DEAD/DEAH box helicase | - |
Sequence
Protein
Download Length: 377 a.a. Molecular weight: 41754.11 Da Isoelectric Point: 6.1401
>NTDB_id=1100528 ACBO77_RS18480 WP_016900968.1 4303030..4304163(+) (pilU) [Xanthomonas arboricola pv. pruni strain Xap 9-4]
MDIGYFLKLMTEKNASDMFLTTGAPVYIKIEGKLYPLGNTGLPPGMVKKIAYSLMDEGQVPQFERELELNMAIALSDAGR
FRVNVFKQRGEVGMVIRAIRSRIPSIEELNLPQVLKDVIMTPRGLVLVVGSTGSGKSTSLASMIDHRNSTTTGHILTIED
PIEYLHKHKMSIVNQREVGLDTHAFQSALKNAMREAPDVILIGEILDAETMEAAIAFAETGHLCLATLHSNNADQTIERI
LNFFPESAHKNVLMNLALNLRAVVSLRLVKGVDGRRRPATEVLLNTPMIRDLLRRGQVHEVKQAMEESLEEGMQTFDQCL
FRMVKSGEIEQEEALRAADSRDGLALKFRLSEGGSGEHDPYADYETAAAPKISHGFI
MDIGYFLKLMTEKNASDMFLTTGAPVYIKIEGKLYPLGNTGLPPGMVKKIAYSLMDEGQVPQFERELELNMAIALSDAGR
FRVNVFKQRGEVGMVIRAIRSRIPSIEELNLPQVLKDVIMTPRGLVLVVGSTGSGKSTSLASMIDHRNSTTTGHILTIED
PIEYLHKHKMSIVNQREVGLDTHAFQSALKNAMREAPDVILIGEILDAETMEAAIAFAETGHLCLATLHSNNADQTIERI
LNFFPESAHKNVLMNLALNLRAVVSLRLVKGVDGRRRPATEVLLNTPMIRDLLRRGQVHEVKQAMEESLEEGMQTFDQCL
FRMVKSGEIEQEEALRAADSRDGLALKFRLSEGGSGEHDPYADYETAAAPKISHGFI
Nucleotide
Download Length: 1134 bp
>NTDB_id=1100528 ACBO77_RS18480 WP_016900968.1 4303030..4304163(+) (pilU) [Xanthomonas arboricola pv. pruni strain Xap 9-4]
ATGGATATCGGCTACTTCCTGAAGCTGATGACCGAAAAGAATGCCTCGGACATGTTCTTGACCACCGGCGCACCGGTGTA
CATCAAGATCGAAGGCAAGCTCTACCCGCTCGGCAATACGGGGTTGCCGCCGGGAATGGTCAAGAAAATCGCTTATTCAT
TGATGGACGAAGGCCAGGTACCGCAGTTCGAGCGCGAGCTGGAGCTCAACATGGCCATTGCCCTGTCCGACGCCGGGCGC
TTCCGCGTGAACGTGTTCAAGCAGCGCGGCGAGGTGGGCATGGTGATCCGCGCCATCCGCAGCCGGATCCCCAGCATCGA
AGAGCTCAACCTGCCGCAGGTGCTCAAGGACGTCATCATGACCCCGCGCGGGCTGGTGCTGGTGGTCGGCTCGACCGGCT
CGGGCAAGTCGACCTCGCTGGCCTCGATGATCGACCACCGCAACAGCACCACCACCGGGCACATCCTCACCATCGAGGAC
CCGATCGAATATCTGCACAAGCACAAGATGTCGATCGTGAACCAGCGCGAGGTGGGCCTGGACACGCACGCCTTCCAGAG
CGCGCTGAAGAACGCGATGCGCGAGGCGCCGGACGTGATCCTGATCGGCGAGATCCTGGATGCCGAGACCATGGAGGCGG
CGATCGCCTTCGCCGAGACCGGCCACCTGTGCCTGGCGACGCTGCACTCCAACAATGCCGACCAGACCATCGAGCGCATC
CTCAACTTCTTCCCCGAGAGCGCGCACAAGAACGTGCTGATGAACCTGGCGCTGAACCTGCGCGCCGTGGTGTCGCTGCG
CCTGGTCAAGGGCGTGGACGGACGCCGCCGGCCGGCGACCGAAGTGCTGCTCAACACGCCGATGATCCGCGACCTGCTGC
GCCGCGGCCAAGTGCACGAGGTCAAGCAGGCGATGGAAGAATCGCTGGAAGAAGGCATGCAGACCTTCGACCAATGCCTG
TTCCGCATGGTCAAGTCCGGCGAAATCGAGCAGGAAGAAGCGCTGCGCGCGGCCGACTCGCGCGATGGCCTGGCGCTGAA
GTTCCGCCTGTCCGAGGGCGGCTCCGGCGAGCACGACCCGTACGCGGATTACGAAACGGCAGCGGCGCCGAAGATCAGTC
ACGGCTTTATCTGA
ATGGATATCGGCTACTTCCTGAAGCTGATGACCGAAAAGAATGCCTCGGACATGTTCTTGACCACCGGCGCACCGGTGTA
CATCAAGATCGAAGGCAAGCTCTACCCGCTCGGCAATACGGGGTTGCCGCCGGGAATGGTCAAGAAAATCGCTTATTCAT
TGATGGACGAAGGCCAGGTACCGCAGTTCGAGCGCGAGCTGGAGCTCAACATGGCCATTGCCCTGTCCGACGCCGGGCGC
TTCCGCGTGAACGTGTTCAAGCAGCGCGGCGAGGTGGGCATGGTGATCCGCGCCATCCGCAGCCGGATCCCCAGCATCGA
AGAGCTCAACCTGCCGCAGGTGCTCAAGGACGTCATCATGACCCCGCGCGGGCTGGTGCTGGTGGTCGGCTCGACCGGCT
CGGGCAAGTCGACCTCGCTGGCCTCGATGATCGACCACCGCAACAGCACCACCACCGGGCACATCCTCACCATCGAGGAC
CCGATCGAATATCTGCACAAGCACAAGATGTCGATCGTGAACCAGCGCGAGGTGGGCCTGGACACGCACGCCTTCCAGAG
CGCGCTGAAGAACGCGATGCGCGAGGCGCCGGACGTGATCCTGATCGGCGAGATCCTGGATGCCGAGACCATGGAGGCGG
CGATCGCCTTCGCCGAGACCGGCCACCTGTGCCTGGCGACGCTGCACTCCAACAATGCCGACCAGACCATCGAGCGCATC
CTCAACTTCTTCCCCGAGAGCGCGCACAAGAACGTGCTGATGAACCTGGCGCTGAACCTGCGCGCCGTGGTGTCGCTGCG
CCTGGTCAAGGGCGTGGACGGACGCCGCCGGCCGGCGACCGAAGTGCTGCTCAACACGCCGATGATCCGCGACCTGCTGC
GCCGCGGCCAAGTGCACGAGGTCAAGCAGGCGATGGAAGAATCGCTGGAAGAAGGCATGCAGACCTTCGACCAATGCCTG
TTCCGCATGGTCAAGTCCGGCGAAATCGAGCAGGAAGAAGCGCTGCGCGCGGCCGACTCGCGCGATGGCCTGGCGCTGAA
GTTCCGCCTGTCCGAGGGCGGCTCCGGCGAGCACGACCCGTACGCGGATTACGAAACGGCAGCGGCGCCGAAGATCAGTC
ACGGCTTTATCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
52.089 |
95.225 |
0.496 |
| pilU | Vibrio cholerae strain A1552 |
48.889 |
95.491 |
0.467 |
| pilU | Acinetobacter baylyi ADP1 |
49.153 |
93.899 |
0.462 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
43.979 |
100 |
0.446 |
| pilT | Pseudomonas aeruginosa PAK |
42.308 |
89.655 |
0.379 |
| pilT | Legionella pneumophila strain ERS1305867 |
41.124 |
89.655 |
0.369 |
| pilT | Legionella pneumophila strain Lp02 |
41.124 |
89.655 |
0.369 |
| pilT | Acinetobacter baumannii strain A118 |
40.828 |
89.655 |
0.366 |
| pilT | Pseudomonas stutzeri DSM 10701 |
40.828 |
89.655 |
0.366 |
| pilT | Acinetobacter nosocomialis M2 |
40.828 |
89.655 |
0.366 |
| pilT | Acinetobacter baumannii D1279779 |
40.828 |
89.655 |
0.366 |
| pilT | Acinetobacter baylyi ADP1 |
40.294 |
90.186 |
0.363 |