Detailed information NTG0109748

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: ABWV75_RS06430
• Genome accession: NZ_AP031487
• Coordinates: 1256830..1257141 (+)
• Length: 103 a.a.
• NCBI ID: WP_115344919.1
• Uniprot ID: -
• Organism: Staphylococcus hominis subsp. novobiosepticus strain NBRC 113928
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1251830..1262141

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABWV75_RS06400 (SKB0068_12280)	-	1252613..1252816 (+)	204	WP_037555982.1	YqgQ family protein	-
ABWV75_RS06405 (SKB0068_12290)	-	1252813..1253799 (+)	987	WP_002449785.1	ROK family glucokinase	-
ABWV75_RS06410 (SKB0068_12300)	-	1253799..1254122 (+)	324	WP_002449910.1	MTH1187 family thiamine-binding protein	-
ABWV75_RS06415 (SKB0068_12310)	-	1254124..1254750 (+)	627	WP_002449717.1	MBL fold metallo-hydrolase	-
ABWV75_RS06420 (SKB0068_12320)	comGA	1254801..1255775 (+)	975	WP_002449861.1	competence type IV pilus ATPase ComGA	Machinery gene
ABWV75_RS06425 (SKB0068_12330)	comGB	1255753..1256811 (+)	1059	WP_353318791.1	competence type IV pilus assembly protein ComGB	-
ABWV75_RS06430 (SKB0068_12340)	comGC	1256830..1257141 (+)	312	WP_115344919.1	competence type IV pilus major pilin ComGC	Machinery gene
ABWV75_RS06435 (SKB0068_12350)	comGD	1257131..1257565 (+)	435	WP_353317518.1	competence type IV pilus minor pilin ComGD	-
ABWV75_RS06440 (SKB0068_12370)	-	1257757..1258254 (+)	498	WP_002449908.1	competence protein ComG	-
ABWV75_RS06445 (SKB0068_12390)	-	1258419..1258928 (+)	510	WP_002449809.1	shikimate kinase	-
ABWV75_RS06450 (SKB0068_12400)	gcvT	1259121..1260212 (+)	1092	WP_002488553.1	glycine cleavage system aminomethyltransferase GcvT	-
ABWV75_RS06455 (SKB0068_12410)	gcvPA	1260229..1261581 (+)	1353	WP_071859878.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11421.59 Da
• Isoelectric Point: 9.1845

>NTDB_id=109748 ABWV75_RS06430 WP_115344919.1 1256830..1257141(+) (comGC) [Staphylococcus hominis subsp. novobiosepticus strain NBRC 113928]
MKKFKHKLKAFTLIEMLLVLLIISVLLILIIPNIAKQMAHIQSTGCEAQVKMVNSQIEAYTLKHNRVPNSIEDLITEGFI
KQGQSSCKSGETISIKNGEAVAE

Nucleotide

• Length: 312 bp

>NTDB_id=109748 ABWV75_RS06430 WP_115344919.1 1256830..1257141(+) (comGC) [Staphylococcus hominis subsp. novobiosepticus strain NBRC 113928]
ATGAAAAAATTCAAACATAAATTAAAAGCTTTTACTTTAATCGAGATGTTACTTGTACTATTAATAATTAGTGTTTTACT
CATTCTTATTATTCCAAACATAGCTAAACAAATGGCACATATTCAATCAACAGGATGTGAAGCACAAGTGAAAATGGTCA
ATAGTCAAATTGAAGCTTATACTTTAAAACATAATAGAGTTCCTAATTCTATTGAGGACTTAATAACTGAAGGGTTTATA
AAACAAGGGCAATCATCTTGTAAGTCTGGAGAAACTATCAGTATTAAAAATGGAGAAGCAGTTGCAGAGTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (7-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	81.373	99.029	0.806
comGC	Staphylococcus aureus N315	81.373	99.029	0.806
comGC/cglC	Streptococcus mitis SK321	46.875	93.204	0.437
comGC/cglC	Streptococcus pneumoniae R6	45.833	93.204	0.427
comGC/cglC	Streptococcus pneumoniae Rx1	45.833	93.204	0.427
comGC/cglC	Streptococcus pneumoniae TIGR4	45.833	93.204	0.427
comGC/cglC	Streptococcus pneumoniae D39	45.833	93.204	0.427
comGC	Bacillus subtilis subsp. subtilis str. 168	44.211	92.233	0.408
comYC	Streptococcus mutans UA159	47.191	86.408	0.408
comYC	Streptococcus mutans UA140	47.191	86.408	0.408
comYC	Streptococcus gordonii str. Challis substr. CH1	46.591	85.437	0.398
comYC	Streptococcus suis isolate S10	46.512	83.495	0.388
comGC/cglC	Streptococcus mitis NCTC 12261	48.193	80.583	0.388
comGC	Lactococcus lactis subsp. cremoris KW2	48.718	75.728	0.369