Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX   Type   Regulator
Locus tag   ACGHT2_RS01790 Genome accession   NZ_AP031455
Coordinates   316318..316803 (+) Length   161 a.a.
NCBI ID   WP_043910355.1    Uniprot ID   -
Organism   Streptococcus pasteurianus strain k46-0107-A9     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 311318..321803
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHT2_RS01790 (K460107A9_02890) comX/sigX 316318..316803 (+) 486 WP_043910355.1 sigma-70 family RNA polymerase sigma factor Regulator
  ACGHT2_RS01795 (K460107A9_02900) - 317682..317945 (-) 264 WP_117479781.1 hypothetical protein -
  ACGHT2_RS01800 (K460107A9_02910) - 318193..318333 (-) 141 WP_013851467.1 hypothetical protein -
  ACGHT2_RS01805 (K460107A9_02920) - 318666..320027 (-) 1362 WP_058692740.1 aspartate kinase -
  ACGHT2_RS01810 (K460107A9_02930) - 320122..320772 (+) 651 WP_003063332.1 HAD family phosphatase -
  ACGHT2_RS01815 (K460107A9_02940) - 320968..321756 (+) 789 WP_003063335.1 enoyl-CoA hydratase -

Sequence

Protein


Download         Length: 161 a.a.        Molecular weight: 19448.34 Da        Isoelectric Point: 7.2744

>NTDB_id=109599 ACGHT2_RS01790 WP_043910355.1 316318..316803(+) (comX/sigX) [Streptococcus pasteurianus strain k46-0107-A9]
MEAFEAYFEKVKPIVLKLRRHYFVKLWDYDDWLQEGRVVLFRLLQEKPDVLQDELSLYSYFKTKFSNYLKDVIRHQESLK
RKFNQLPYEEISDVGHCLAQTSFLDLADYVAYQERLQAVEQRLGIEAREKLAKVMRGERFEGKKAFLAQIEPFFNEFKNN
F

Nucleotide


Download         Length: 486 bp        

>NTDB_id=109599 ACGHT2_RS01790 WP_043910355.1 316318..316803(+) (comX/sigX) [Streptococcus pasteurianus strain k46-0107-A9]
ATGGAAGCATTTGAAGCCTATTTTGAAAAAGTTAAACCGATTGTACTTAAATTGCGTCGTCACTATTTTGTTAAATTGTG
GGACTACGATGATTGGTTACAAGAGGGACGGGTGGTTCTTTTCCGCCTTTTACAAGAAAAGCCAGACGTGTTGCAGGATG
AGTTGTCCCTTTATTCTTATTTTAAAACAAAGTTTTCCAACTATCTCAAGGATGTGATTCGTCATCAGGAAAGCCTGAAA
CGCAAGTTTAATCAGCTACCATATGAGGAAATTAGTGATGTGGGGCATTGTTTAGCACAAACAAGTTTTCTGGATCTGGC
GGATTATGTGGCTTATCAGGAGCGGCTGCAAGCGGTTGAGCAGCGACTGGGAATAGAGGCACGAGAGAAATTGGCGAAGG
TGATGCGTGGGGAACGCTTTGAGGGAAAAAAGGCTTTTCTAGCCCAGATTGAGCCCTTCTTTAACGAGTTTAAAAATAAT
TTCTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.