Detailed information NTG1037490

Bioinformatically predicted

Overview

• Name: comX/comX2
• Type: Regulator
• Locus tag: AD178_RS00070
• Genome accession: NZ_OX244288
• Coordinates: 14254..14733 (+)
• Length: 159 a.a.
• NCBI ID: WP_000588894.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PT8105 isolate 2RLC4
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 9254..19733

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AD178_RS00055 (SAMEA1463109_00011)	tilS	10335..11612 (+)	1278	WP_001208995.1	tRNA lysidine(34) synthetase TilS	-
AD178_RS00060 (SAMEA1463109_00012)	hpt	11616..12158 (+)	543	WP_000892185.1	hypoxanthine phosphoribosyltransferase	-
AD178_RS00065 (SAMEA1463109_00013)	ftsH	12174..14132 (+)	1959	WP_000744546.1	ATP-dependent zinc metalloprotease FtsH	-
AD178_RS00070 (SAMEA1463109_00014)	comX/comX2	14254..14733 (+)	480	WP_000588894.1	sigma-70 family RNA polymerase sigma factor	Regulator
AD178_RS00080 (SAMEA1463109_00016)	-	14956..15909 (-)	954	WP_001155341.1	IS30-like element ISSpn8 family transposase	-

Sequence

Protein

• Length: 159 a.a.
• Molecular weight: 19885.57 Da
• Isoelectric Point: 7.3797

>NTDB_id=1037490 AD178_RS00070 WP_000588894.1 14254..14733(+) (comX/comX2) [Streptococcus pneumoniae strain PT8105 isolate 2RLC4]
MIKELYEEVQGTVYKCRNEYYLHLWELSDWDQEGMLCLHELISREEGLVDDIPRLRKYFKTKFRNRILDYIRKQESQKRR
YDKEPYEEVGEISHRISEGGLWLDDYYLFHETLRDYRNKQSKEKQEELERVLSNERFRGRQRVLRDLRIVFKEFTIRIH

Nucleotide

• Length: 480 bp

>NTDB_id=1037490 AD178_RS00070 WP_000588894.1 14254..14733(+) (comX/comX2) [Streptococcus pneumoniae strain PT8105 isolate 2RLC4]
ATGATTAAAGAATTGTATGAAGAAGTCCAAGGGACTGTGTATAAGTGTAGAAATGAATATTACCTTCATTTATGGGAATT
GTCGGATTGGGACCAAGAAGGCATGCTCTGCTTACATGAATTGATTAGTAGAGAAGAAGGACTGGTAGACGATATTCCAC
GTTTAAGGAAATATTTCAAAACCAAGTTTCGAAATCGAATTTTAGACTATATCCGTAAGCAGGAAAGTCAGAAGCGTAGA
TACGATAAAGAACCCTATGAAGAAGTGGGTGAGATCAGTCATCGTATAAGTGAGGGGGGTCTCTGGCTAGATGATTATTA
TCTCTTTCATGAAACACTAAGAGATTATAGAAACAAACAAAGTAAAGAGAAACAAGAAGAACTAGAACGCGTCTTAAGCA
ATGAACGATTTCGAGGGCGTCAAAGAGTATTAAGAGACTTACGCATTGTGTTTAAGGAGTTTACTATCCGTATCCACTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/comX2	Streptococcus pneumoniae Rx1	99.371	100	0.994
comX/comX1	Streptococcus pneumoniae Rx1	99.371	100	0.994
comX/comX2	Streptococcus pneumoniae D39	99.371	100	0.994
comX/comX1	Streptococcus pneumoniae D39	99.371	100	0.994
comX/comX2	Streptococcus pneumoniae R6	99.371	100	0.994
comX/comX1	Streptococcus pneumoniae R6	99.371	100	0.994
comX/comX2	Streptococcus pneumoniae TIGR4	98.742	100	0.987
comX/comX1	Streptococcus pneumoniae TIGR4	98.742	100	0.987
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	91.824	100	0.918
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	91.824	100	0.918
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	89.937	100	0.899
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	89.172	98.742	0.881
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	48.408	98.742	0.478
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	48.408	98.742	0.478
comX/sigX	Streptococcus mutans UA159	46	94.34	0.434
comX/sigX	Streptococcus suis isolate S10	45.695	94.969	0.434
comX/sigX	Streptococcus suis D9	45.695	94.969	0.434
comX/sigX	Streptococcus suis P1/7	45.695	94.969	0.434
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	39.216	96.226	0.377
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	39.216	96.226	0.377
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	40	94.34	0.377
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	40	94.34	0.377
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	40	94.34	0.377
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	40	94.34	0.377