Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACB354_RS03095 | Genome accession | NZ_CP167004 |
| Coordinates | 567785..568204 (+) | Length | 139 a.a. |
| NCBI ID | WP_021340323.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain Isolate 28 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 562785..573204
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACB354_RS03040 (ACB354_03040) | - | 562936..563103 (+) | 168 | WP_021340232.1 | hypothetical protein | - |
| ACB354_RS03045 (ACB354_03045) | - | 563342..563593 (+) | 252 | WP_021340237.1 | AlpA family transcriptional regulator | - |
| ACB354_RS03050 (ACB354_03050) | - | 563624..563758 (+) | 135 | WP_021340229.1 | hypothetical protein | - |
| ACB354_RS03055 (ACB354_03055) | - | 563774..564088 (+) | 315 | WP_021340228.1 | helix-turn-helix domain-containing protein | - |
| ACB354_RS03060 (ACB354_03060) | - | 564102..565022 (+) | 921 | WP_021340238.1 | phage replisome organizer N-terminal domain-containing protein | - |
| ACB354_RS03065 (ACB354_03065) | - | 565032..565874 (+) | 843 | WP_011018146.1 | ATP-binding protein | - |
| ACB354_RS03070 (ACB354_03070) | - | 565874..566011 (+) | 138 | WP_011018145.1 | hypothetical protein | - |
| ACB354_RS03075 (ACB354_03075) | - | 566022..566378 (+) | 357 | WP_011018144.1 | HTH domain-containing protein | - |
| ACB354_RS03080 (ACB354_03080) | - | 566359..566613 (+) | 255 | WP_011018143.1 | hypothetical protein | - |
| ACB354_RS03085 (ACB354_03085) | - | 566635..567117 (+) | 483 | WP_011018142.1 | siphovirus Gp157 family protein | - |
| ACB354_RS03090 (ACB354_03090) | - | 567118..567792 (+) | 675 | WP_021340321.1 | ERF family protein | - |
| ACB354_RS03095 (ACB354_03095) | ssbA | 567785..568204 (+) | 420 | WP_021340323.1 | single-stranded DNA-binding protein | Machinery gene |
| ACB354_RS03100 (ACB354_03100) | - | 568210..568413 (+) | 204 | WP_011106686.1 | hypothetical protein | - |
| ACB354_RS03105 (ACB354_03105) | - | 568413..568853 (+) | 441 | WP_011285574.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ACB354_RS03110 (ACB354_03110) | - | 568850..569206 (+) | 357 | WP_023078113.1 | hypothetical protein | - |
| ACB354_RS03115 (ACB354_03115) | - | 569203..569454 (+) | 252 | WP_032462267.1 | hypothetical protein | - |
| ACB354_RS03120 (ACB354_03120) | - | 569448..569732 (+) | 285 | WP_011018137.1 | DUF3310 domain-containing protein | - |
| ACB354_RS03125 (ACB354_03125) | - | 569729..570133 (+) | 405 | WP_011018136.1 | YopX family protein | - |
| ACB354_RS03130 (ACB354_03130) | - | 570130..570300 (+) | 171 | WP_011018135.1 | hypothetical protein | - |
| ACB354_RS03135 (ACB354_03135) | - | 570297..570581 (+) | 285 | WP_011018134.1 | hypothetical protein | - |
| ACB354_RS03140 (ACB354_03140) | - | 570583..571215 (+) | 633 | WP_011018133.1 | N-6 DNA methylase | - |
| ACB354_RS03145 (ACB354_03145) | - | 571336..571707 (+) | 372 | WP_011018132.1 | DUF1642 domain-containing protein | - |
| ACB354_RS03150 (ACB354_03150) | - | 571704..571970 (+) | 267 | WP_011018131.1 | hypothetical protein | - |
| ACB354_RS03155 (ACB354_03155) | - | 572244..572684 (+) | 441 | WP_002990052.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
Sequence
Protein
Download Length: 139 a.a. Molecular weight: 15611.30 Da Isoelectric Point: 4.6702
>NTDB_id=1037036 ACB354_RS03095 WP_021340323.1 567785..568204(+) (ssbA) [Streptococcus pyogenes strain Isolate 28]
MINNIVLVGRMTKDAELRYTASQVAVATFTLAVNRRFKEQNGEREADFINCVIWRQSAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVAESFQMLESCNQQSGQGNSSQNDNSQPFGNSNPMDISDDDLPF
MINNIVLVGRMTKDAELRYTASQVAVATFTLAVNRRFKEQNGEREADFINCVIWRQSAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVAESFQMLESCNQQSGQGNSSQNDNSQPFGNSNPMDISDDDLPF
Nucleotide
Download Length: 420 bp
>NTDB_id=1037036 ACB354_RS03095 WP_021340323.1 567785..568204(+) (ssbA) [Streptococcus pyogenes strain Isolate 28]
ATGATTAACAACATTGTGCTAGTTGGTCGCATGACCAAGGACGCAGAGCTTCGCTATACAGCGAGTCAAGTAGCTGTAGC
TACGTTCACACTTGCGGTAAACCGCAGATTTAAAGAGCAAAACGGGGAGAGAGAAGCAGATTTCATTAACTGTGTTATCT
GGCGACAGTCTGCTGAAAATCTGGCAAACTGGGCTAAAAAAGGTGCCTTGATCGGAATTACAGGTCGTATCCAGACACGC
AACTACGAAAACCAACAAGGTCAACGTGTCTATGTAACAGAAGTTGTTGCAGAGAGTTTCCAAATGTTGGAAAGTTGCAA
TCAACAATCTGGTCAAGGTAACTCTTCGCAAAACGATAACAGTCAACCGTTTGGCAATTCAAACCCAATGGATATTTCAG
ATGATGATCTGCCGTTTTAA
ATGATTAACAACATTGTGCTAGTTGGTCGCATGACCAAGGACGCAGAGCTTCGCTATACAGCGAGTCAAGTAGCTGTAGC
TACGTTCACACTTGCGGTAAACCGCAGATTTAAAGAGCAAAACGGGGAGAGAGAAGCAGATTTCATTAACTGTGTTATCT
GGCGACAGTCTGCTGAAAATCTGGCAAACTGGGCTAAAAAAGGTGCCTTGATCGGAATTACAGGTCGTATCCAGACACGC
AACTACGAAAACCAACAAGGTCAACGTGTCTATGTAACAGAAGTTGTTGCAGAGAGTTTCCAAATGTTGGAAAGTTGCAA
TCAACAATCTGGTCAAGGTAACTCTTCGCAAAACGATAACAGTCAACCGTTTGGCAATTCAAACCCAATGGATATTTCAG
ATGATGATCTGCCGTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
54.857 |
100 |
0.691 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
52.941 |
100 |
0.647 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
43.885 |
100 |
0.439 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
43.885 |
100 |
0.439 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
43.165 |
100 |
0.432 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
43.165 |
100 |
0.432 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
43.165 |
100 |
0.432 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
43.165 |
100 |
0.432 |
| ssbB/cilA | Streptococcus mitis SK321 |
43.165 |
100 |
0.432 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
55.769 |
74.82 |
0.417 |
| ssbA | Streptococcus mutans UA159 |
41.007 |
100 |
0.41 |
| ssb | Vibrio cholerae strain A1552 |
30.636 |
100 |
0.381 |