Detailed information NTG1009491

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: H0502_RS09200
• Genome accession: NZ_LR822013
• Coordinates: 1783657..1784085 (+)
• Length: 142 a.a.
• NCBI ID: WP_253269448.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus isolate STH_CIRM_32
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1778657..1789085

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H0502_RS09180 (STHERMO_2045)	-	1781008..1781370 (+)	363	WP_014608746.1	DUF1033 family protein	-
H0502_RS09185 (STHERMO_2046)	comGA/cglA/cilD	1781451..1782392 (+)	942	WP_014608745.1	competence type IV pilus ATPase ComGA	Machinery gene
H0502_RS09190 (STHERMO_2047)	comGB	1782274..1783374 (+)	1101	WP_120764773.1	competence type IV pilus assembly protein ComGB	Machinery gene
H0502_RS09195 (STHERMO_2048)	comGC	1783371..1783697 (+)	327	WP_002946126.1	competence type IV pilus major pilin ComGC	Machinery gene
H0502_RS09200 (STHERMO_2049)	comGD	1783657..1784085 (+)	429	WP_253269448.1	competence type IV pilus minor pilin ComGD	Machinery gene
H0502_RS09205 (STHERMO_2050)	comGE	1784057..1784350 (+)	294	WP_082309154.1	competence type IV pilus minor pilin ComGE	Machinery gene
H0502_RS09210 (STHERMO_2051)	comGF	1784334..1784771 (+)	438	WP_082309153.1	competence type IV pilus minor pilin ComGF	Machinery gene
H0502_RS09215 (STHERMO_2052)	comGG	1784749..1785066 (+)	318	WP_082309152.1	competence type IV pilus minor pilin ComGG	Machinery gene
H0502_RS09220 (STHERMO_2053)	comGH	1785111..1786067 (+)	957	WP_084831205.1	class I SAM-dependent methyltransferase	Machinery gene
H0502_RS09225 (STHERMO_2054)	-	1786123..1787316 (+)	1194	WP_179970807.1	acetate kinase	-
H0502_RS09230 (STHERMO_2055)	-	1787565..1787762 (+)	198	WP_014727723.1	helix-turn-helix transcriptional regulator	-
H0502_RS10225 (STHERMO_2056)	-	1787774..1788049 (+)	276	WP_232086463.1	CAAX protease	-
H0502_RS10230 (STHERMO_2057)	-	1788093..1788431 (+)	339	WP_232086462.1	CPBP family intramembrane glutamic endopeptidase	-
H0502_RS09240 (STHERMO_2058)	-	1788505..1788948 (+)	444	WP_084829882.1	CAAX protease	-

Sequence

Protein

• Length: 142 a.a.
• Molecular weight: 15829.42 Da
• Isoelectric Point: 10.3330

>NTDB_id=1009491 H0502_RS09200 WP_253269448.1 1783657..1784085(+) (comGD) [Streptococcus thermophilus isolate STH_CIRM_32]
MRNMVVKAAQWPIRAFTLLESLMTLAVVVFLTLSLSGSVTGIFQQVEINLFYLRFEYLYRDSQRLASAEGSNVELQLTKD
KVGNGRSSLLIPKSIHLDKGQTLVFDAKGGNSSLTKIRFSSDKEVVTYLLNMGSGKYKKTIS

Nucleotide

• Length: 429 bp

>NTDB_id=1009491 H0502_RS09200 WP_253269448.1 1783657..1784085(+) (comGD) [Streptococcus thermophilus isolate STH_CIRM_32]
ATGCGAAACATGGTGGTGAAAGCCGCTCAGTGGCCAATTAGAGCTTTCACCTTGTTGGAGAGCCTGATGACACTAGCAGT
GGTTGTCTTTCTCACTCTGAGTTTGTCAGGCTCAGTCACAGGTATTTTTCAGCAGGTCGAGATTAATCTTTTTTATCTGC
GTTTTGAGTACCTATATCGAGATAGTCAGCGCTTGGCATCAGCGGAAGGATCTAATGTTGAATTGCAGTTAACTAAGGAT
AAGGTTGGTAATGGAAGGTCTAGTCTGCTTATTCCTAAAAGTATTCATCTGGATAAGGGGCAGACGCTAGTGTTTGATGC
TAAAGGGGGCAACTCTAGCCTCACGAAAATTCGTTTTTCAAGTGATAAGGAGGTGGTGACCTATCTGCTTAACATGGGCA
GTGGTAAATATAAAAAGACGATCTCTTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Streptococcus mutans UA140	51.908	92.254	0.479
comGD	Streptococcus mutans UA159	51.908	92.254	0.479
comGD	Streptococcus gordonii str. Challis substr. CH1	40.714	98.592	0.401
comGD/cglD	Streptococcus pneumoniae Rx1	43.307	89.437	0.387
comGD/cglD	Streptococcus pneumoniae D39	43.307	89.437	0.387
comGD/cglD	Streptococcus pneumoniae R6	43.307	89.437	0.387
comGD/cglD	Streptococcus mitis NCTC 12261	43.307	89.437	0.387
comGD/cglD	Streptococcus pneumoniae TIGR4	43.307	89.437	0.387
comGD/cglD	Streptococcus mitis SK321	42.52	89.437	0.38
comGD	Lactococcus lactis subsp. cremoris KW2	40.909	92.958	0.38