Detailed information
Bioinformatically predicted
Overview
| Name | pilR | Type | Regulator |
| Locus tag | ABJ384_RS13570 | Genome accession | NZ_CP157981 |
| Coordinates | 2811797..2813209 (+) | Length | 470 a.a. |
| NCBI ID | WP_349929754.1 | Uniprot ID | A0AAU7T1D5 |
| Organism | Acinetobacter sp. A1-4-2 | ||
| Function | regulation of type IV pilus assembly (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2806797..2818209
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABJ384_RS13550 (ABJ384_13540) | thrC | 2807040..2808179 (+) | 1140 | WP_349927940.1 | threonine synthase | - |
| ABJ384_RS13555 (ABJ384_13545) | - | 2808282..2809328 (-) | 1047 | WP_349927942.1 | serine hydrolase | - |
| ABJ384_RS13560 (ABJ384_13550) | - | 2809549..2810184 (+) | 636 | WP_349927944.1 | response regulator | - |
| ABJ384_RS13565 (ABJ384_13555) | pilS | 2810212..2811777 (+) | 1566 | WP_349927946.1 | ATP-binding protein | Regulator |
| ABJ384_RS13570 (ABJ384_13560) | pilR | 2811797..2813209 (+) | 1413 | WP_349929754.1 | sigma-54 dependent transcriptional regulator | Regulator |
| ABJ384_RS13575 (ABJ384_13565) | - | 2813235..2814413 (-) | 1179 | WP_349927948.1 | S41 family peptidase | - |
| ABJ384_RS13580 (ABJ384_13570) | gpmI | 2814440..2815987 (-) | 1548 | WP_349927950.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| ABJ384_RS13585 (ABJ384_13575) | lptG | 2816110..2817180 (-) | 1071 | WP_349927952.1 | LPS export ABC transporter permease LptG | - |
Sequence
Protein
Download Length: 470 a.a. Molecular weight: 53315.29 Da Isoelectric Point: 6.2795
>NTDB_id=1009493 ABJ384_RS13570 WP_349929754.1 2811797..2813209(+) (pilR) [Acinetobacter sp. A1-4-2]
MVEQQPLVLLVDDEEDLCTLMQMSLSRIGIKTHIAYRLEQAKKFLSEYRYDACLTDLNLPDGNGLQLVEWINQHFPSVPV
AVLTAYGNMEIAIAALKAGAFDFVSKPVNQKHLEQLLQKAFNKPQEHLQIKEDSLEQKLLIGQSLPIQQLRVTLNKIARS
QAPVFITGESGTGKEVIANLVHRLSNRNEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLIQSAHGGSLFLDE
IAELPLNMQVKLLRAVQEKRIRPVGSDCEIDVDFRVISASHQDLEALVQQGRFRQDLFFRIHVMDLVLPPLRDRGDDIIL
LAHHFIQKISQEWDIPQKQLTDRAKTFLLSQYYPGNVRELRNIIERAITLSDDERIDLQHLQSAPLRYPTVAVPEVTEGQ
HSLRSDIVISSKKLPDEGLELYLENIEKDILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDED
MVEQQPLVLLVDDEEDLCTLMQMSLSRIGIKTHIAYRLEQAKKFLSEYRYDACLTDLNLPDGNGLQLVEWINQHFPSVPV
AVLTAYGNMEIAIAALKAGAFDFVSKPVNQKHLEQLLQKAFNKPQEHLQIKEDSLEQKLLIGQSLPIQQLRVTLNKIARS
QAPVFITGESGTGKEVIANLVHRLSNRNEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLIQSAHGGSLFLDE
IAELPLNMQVKLLRAVQEKRIRPVGSDCEIDVDFRVISASHQDLEALVQQGRFRQDLFFRIHVMDLVLPPLRDRGDDIIL
LAHHFIQKISQEWDIPQKQLTDRAKTFLLSQYYPGNVRELRNIIERAITLSDDERIDLQHLQSAPLRYPTVAVPEVTEGQ
HSLRSDIVISSKKLPDEGLELYLENIEKDILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDED
Nucleotide
Download Length: 1413 bp
>NTDB_id=1009493 ABJ384_RS13570 WP_349929754.1 2811797..2813209(+) (pilR) [Acinetobacter sp. A1-4-2]
ATTGTGGAACAACAACCACTTGTCTTATTGGTGGATGATGAGGAAGATTTGTGTACCCTCATGCAAATGTCGTTATCTCG
TATTGGAATTAAAACCCATATTGCCTATCGTCTGGAACAGGCCAAAAAATTCTTGTCTGAATACCGCTATGATGCCTGTC
TAACCGATTTAAATTTACCGGACGGCAATGGACTGCAACTGGTGGAATGGATTAACCAGCACTTTCCATCCGTACCCGTG
GCGGTACTGACGGCATATGGCAATATGGAAATCGCCATCGCAGCACTCAAAGCTGGTGCCTTCGATTTTGTCAGCAAACC
CGTGAATCAGAAGCATCTGGAGCAGCTCCTGCAAAAAGCCTTTAACAAACCACAAGAACATTTGCAGATCAAGGAAGATA
GCCTGGAGCAAAAACTGTTAATTGGACAGTCACTGCCAATTCAACAGTTACGGGTGACCTTAAATAAAATTGCCCGCTCT
CAGGCACCTGTTTTTATTACCGGTGAATCCGGAACAGGAAAAGAAGTCATTGCCAATCTGGTGCATCGCCTGAGTAACCG
CAATGAAGGACCTTTTATTGCCATTAACTGCGGCGCCATTCCGACTGAATTGATGGAAAGCGAACTGTTCGGGCATAAAA
AAGGCAGCTTTACCGGCGCCACTCAGGACAAACAGGGGCTGATTCAATCTGCTCACGGCGGCAGTCTGTTTCTGGATGAA
ATTGCCGAACTGCCTTTAAACATGCAGGTTAAACTGCTGCGTGCCGTACAGGAAAAACGCATTCGTCCAGTCGGTTCGGA
CTGTGAAATTGATGTCGATTTCCGCGTGATTAGTGCCAGCCATCAGGATCTGGAAGCTCTGGTTCAGCAAGGCCGCTTTA
GACAGGACTTGTTCTTCCGTATCCATGTCATGGATCTGGTCTTGCCTCCACTACGTGACCGCGGTGACGATATTATTTTA
TTGGCCCATCACTTTATTCAGAAAATTAGTCAGGAATGGGATATTCCGCAAAAACAGCTGACTGATCGTGCGAAAACCTT
TTTATTGAGTCAGTATTATCCCGGCAATGTCCGCGAACTGCGCAATATTATTGAACGCGCCATTACCTTAAGCGATGATG
AAAGAATCGATTTGCAACACCTGCAAAGCGCACCTTTACGCTACCCTACTGTAGCAGTGCCAGAGGTAACGGAAGGCCAG
CACAGCTTGCGCAGTGACATCGTGATATCTTCCAAGAAATTACCCGATGAAGGTTTGGAGCTTTATCTGGAAAATATTGA
AAAAGATATTTTACTCAATGCATTAAATTTAACCCATTGGAACAGAACACTGGCTGCCAAGAAACTGGGCATGTCTTTCC
GTTCCTTGCGTTATCGACTGAAAAAATTTGGTTTAGATACCGACGAGGACTAG
ATTGTGGAACAACAACCACTTGTCTTATTGGTGGATGATGAGGAAGATTTGTGTACCCTCATGCAAATGTCGTTATCTCG
TATTGGAATTAAAACCCATATTGCCTATCGTCTGGAACAGGCCAAAAAATTCTTGTCTGAATACCGCTATGATGCCTGTC
TAACCGATTTAAATTTACCGGACGGCAATGGACTGCAACTGGTGGAATGGATTAACCAGCACTTTCCATCCGTACCCGTG
GCGGTACTGACGGCATATGGCAATATGGAAATCGCCATCGCAGCACTCAAAGCTGGTGCCTTCGATTTTGTCAGCAAACC
CGTGAATCAGAAGCATCTGGAGCAGCTCCTGCAAAAAGCCTTTAACAAACCACAAGAACATTTGCAGATCAAGGAAGATA
GCCTGGAGCAAAAACTGTTAATTGGACAGTCACTGCCAATTCAACAGTTACGGGTGACCTTAAATAAAATTGCCCGCTCT
CAGGCACCTGTTTTTATTACCGGTGAATCCGGAACAGGAAAAGAAGTCATTGCCAATCTGGTGCATCGCCTGAGTAACCG
CAATGAAGGACCTTTTATTGCCATTAACTGCGGCGCCATTCCGACTGAATTGATGGAAAGCGAACTGTTCGGGCATAAAA
AAGGCAGCTTTACCGGCGCCACTCAGGACAAACAGGGGCTGATTCAATCTGCTCACGGCGGCAGTCTGTTTCTGGATGAA
ATTGCCGAACTGCCTTTAAACATGCAGGTTAAACTGCTGCGTGCCGTACAGGAAAAACGCATTCGTCCAGTCGGTTCGGA
CTGTGAAATTGATGTCGATTTCCGCGTGATTAGTGCCAGCCATCAGGATCTGGAAGCTCTGGTTCAGCAAGGCCGCTTTA
GACAGGACTTGTTCTTCCGTATCCATGTCATGGATCTGGTCTTGCCTCCACTACGTGACCGCGGTGACGATATTATTTTA
TTGGCCCATCACTTTATTCAGAAAATTAGTCAGGAATGGGATATTCCGCAAAAACAGCTGACTGATCGTGCGAAAACCTT
TTTATTGAGTCAGTATTATCCCGGCAATGTCCGCGAACTGCGCAATATTATTGAACGCGCCATTACCTTAAGCGATGATG
AAAGAATCGATTTGCAACACCTGCAAAGCGCACCTTTACGCTACCCTACTGTAGCAGTGCCAGAGGTAACGGAAGGCCAG
CACAGCTTGCGCAGTGACATCGTGATATCTTCCAAGAAATTACCCGATGAAGGTTTGGAGCTTTATCTGGAAAATATTGA
AAAAGATATTTTACTCAATGCATTAAATTTAACCCATTGGAACAGAACACTGGCTGCCAAGAAACTGGGCATGTCTTTCC
GTTCCTTGCGTTATCGACTGAAAAAATTTGGTTTAGATACCGACGAGGACTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilR | Acinetobacter baumannii strain A118 |
76.059 |
100 |
0.764 |
| pilR | Pseudomonas aeruginosa PAK |
49.237 |
97.66 |
0.481 |